TCONS_00035794-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035794-protein
Unique NameTCONS_00035794-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035794-protein ID=TCONS_00035794-protein|Name=TCONS_00035794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
FKGFATTVIHDGQDPDKWTSKAVVPPISMSTTFKQAGPGEHSGYEYSRSG
NPTRDCFEATLASLEGAKYGLAFASGLGATTILMMTLKAGDHVVVSDDVY
G
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021003XLOC_021003Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035794TCONS_00035794Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePFAMPF01053Cys_Met_Meta_PPcoord: 6..101
e-value: 1.2E-28
score: 99.6
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 2..101
e-value: 7.7E-20
score: 70.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..49
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 3..101

Blast
[Close]
BLAST of TCONS_00035794-protein vs. Swiss-Prot (Human)
Match: CGL (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 9.425e-47
Identity = 68/101 (67.33%), Postives = 82/101 (81.19%), Query Frame = 0 
Query:    1 FKGFATTVIHDGQDPDKWTSKAVVPPISMSTTFKQAGPGEHSGYEYSRSGNPTRDCFEATLASLEGAKYGLAFASGLGATTILMMTLKAGDHVVVSDDVYG 101
            F+ FAT  IH GQDP++WTS+AVVPPIS+STTFKQ  PG+HSG+EYSRSGNPTR+C E  +A+L+GAKY LAFASGL AT  +   LKAGD ++  DDVYG
Sbjct:   15 FQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYG 115
The following BLAST results are available for this feature:
BLAST of TCONS_00035794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CGL9.425e-4767.33Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
back to top