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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00035739-protein ID=TCONS_00035739-protein|Name=TCONS_00035739-protein|organism=Clytia hemisphaerica|type=polypeptide|length=946bp
MASFKPPKQWVLTEQETITSFASWQSNIIYHLSLNNEFAQFIEPTAAWQK
QSVTNRGLANDPNTVPENRRRTALQKNILLDQMLGLIAQFSPSLLRSDII
KRSTSLQWIWQRIRKHYSFCQSEVNFLKLSTIKRQEGERFETLFQRIVAH
IEDNLLTTESGLTHDGALVTENEEMSPTTERLAVYLWLNLIDERLPSYVA
RVFAHDLQSRSLKDIQPQICAAMDSLLTELNVQEDIQVNYSRSSYNNRRY
PGKPSQRNSHPQKSHQKSKTCILCKAASRPYQGHDVSTCWFISKFDKKEI
ASALAVEVDPGNDLEDPLDHSDVKSCTSAPPPDKLEQGTSIARVQSNSSP
FFYAFLKHHTCRVVIDTGATSSLVSADFIARAGIKLTPTSHAARQIDKTP
LNLLGEAKFKLFFGDYELPIEALVTESLDCDILAGVPFCKSNNIDVHLGT
EEISLNQKRIPYGSRPNSIQHDIYRVQSTVLRNDSTSVVYPGEFLEIHNQ
AISHYEGEVAIEPRTDSPANGNWPPPTISRVINGTVRIPNETNSPVYVSK
SQHIATIRRVTTPTPPTPFHQSEVISPASKQLITDCKPKSILFSSNILVD
PDSQLTPSEKGQFLQLHKDYDNVFNPQFGVYNDNSGRIRAKLNFGNVDPP
PRKPKLPFYNHTQLQQLQEEADKLEALGVLAKPEDVGVDVQFASPSLLVK
KPDGSFRFCTAFNELCQYTKVLPVASQSCDDVLRRLSSWKYLIKTDLTKS
FFQIPLDSASVPYLGTVTPFKGLRIYLRSAMGMPGSSEHLQELTSRVLGD
FIQEGFVTVLADDLHVGGNTIQETFINWSRVLHRLRENNLTLSASKTVIC
PKSTTVLGWRWTSGQLSVTPHKISPLVASAPPTTCTAMRSYIGAYKAIAR
CIPRHSSLLSPLEAIIKNTSHRTSANPKTLYNFFRTISRVSRHLPS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR021109 | Aspartic peptidase domain | GENE3D | 2.40.70.10 | | coord: 345..460
e-value: 1.1E-11
score: 44.3 |
| IPR021109 | Aspartic peptidase domain | SUPERFAMILY | 50630 | Acid proteases | coord: 347..432 |
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 781..861
e-value: 8.0E-12
score: 44.6 |
| None | No IPR available | GENE3D | 3.10.10.10 | | coord: 645..780
e-value: 2.3E-11
score: 43.1 |
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 862..937
e-value: 4.9E-7
score: 29.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 243..267 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 311..338 |
| None | No IPR available | CDD | cd01647 | RT_LTR | coord: 693..860
e-value: 1.11562E-26
score: 107.681 |
| None | No IPR available | CDD | cd00303 | retropepsin_like | coord: 355..440
e-value: 6.66203E-10
score: 56.1908 |
| None | No IPR available | SUPERFAMILY | 56672 | DNA/RNA polymerases | coord: 650..920 |
| IPR000477 | Reverse transcriptase domain | PFAM | PF00078 | RVT_1 | coord: 727..859
e-value: 4.0E-7
score: 29.7 |
| IPR000477 | Reverse transcriptase domain | PROSITE | PS50878 | RT_POL | coord: 680..861
score: 9.962 |
Blast
The following BLAST results are available for this feature:
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