TCONS_00035662-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035662-protein
Unique NameTCONS_00035662-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035662-protein ID=TCONS_00035662-protein|Name=TCONS_00035662-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
GKTVFLIINTDEKQSLLFIKFIASNTMENKVTIVLRLIRSFEHRTIRNVV
YHDIDLDLLTLEFINFVKTDLKTKTSLPPPFRTFKYDTMKVQHKAFGSKT
SDPVINTFNDDELILNIEKSLRDNGIVNETEISFFVLDDYRKYQENPQIA
W
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020894XLOC_020894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035662TCONS_00035662Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018794UPF0538
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018794Uncharacterised protein family UPF0538PFAMPF10209DUF2340coord: 33..151
e-value: 7.2E-39
score: 132.9

Blast
[Close]
BLAST of TCONS_00035662-protein vs. Swiss-Prot (Human)
Match: CB076 (UPF0538 protein C2orf76 OS=Homo sapiens GN=C2orf76 PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 1.306e-39
Identity = 59/123 (47.97%), Postives = 88/123 (71.54%), Query Frame = 0 
Query:   29 NKVTIVLRLIRSFEHRTIRNVVYHDIDLDLLTLEFINFVKTDLKTKTSLPPPFRTFKYDTMKVQHKAFGSKTSDPVINTFNDDELILNIEKSLRDNGIVNETEISFFVLDDYRKYQENPQIAW 151
             +VTI +RLIRSFEHR  + VVYH ++LD    EFI F+K D+  +T+LPPPFR +KYD +K+ H+A  SKT++ V++  +D+ L+L  + +L+  GI +ETEI+FF  +DY+ Y+ NP  +W
Sbjct:    4 GEVTITVRLIRSFEHRNFKPVVYHGVNLDQTVKEFIVFLKQDIPLRTNLPPPFRNYKYDALKIIHQAHKSKTNELVLSLEDDERLLLKEDSTLKAAGIASETEIAFFCEEDYKNYKANPISSW 126
The following BLAST results are available for this feature:
BLAST of TCONS_00035662-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CB0761.306e-3947.97UPF0538 protein C2orf76 OS=Homo sapiens GN=C2orf76... [more]
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