TCONS_00035631-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035631-protein
Unique NameTCONS_00035631-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length318

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035631-protein ID=TCONS_00035631-protein|Name=TCONS_00035631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MMEKQKREFEITRPRLRLGSTSSSTCSSSLTIGSDDLVTIGLTSVEDNKF
HQQLPTHAPLQRRETFPPINTNAASLLISDSIELNVGGTVYTTTGWILAR
EHTSWLAKNLESMAMLDRRGRYFIDRDGGLFRYILEYLGTGEIRIPNDFP
DIESLRKEATFYGLKIMKRMLDKHLINQDNWDPNKGHYITLTEHATYNVK
FRDNLNVVFKRISSITVAGHVKSCRKVFGNKLSLDRDSNENLDRYSCRML
IVQGNEMTVFDVLKENNYEMVSNNKTDAASLGRTGLGERRGSLADLSFEQ
NKRWIHVTNYYFRRKSVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020868XLOC_020868Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035631TCONS_00035631Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR003131T1-type_BTB
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051260protein homooligomerization
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051260 protein homooligomerization
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 80..179
e-value: 1.6E-4
score: 31.0
NoneNo IPR availableGENE3D3.30.710.10coord: 70..186
e-value: 1.4E-22
score: 79.3
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 82..165
e-value: 3.5E-15
score: 56.0
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 80..177

Blast
[Close]
BLAST of TCONS_00035631-protein vs. Swiss-Prot (Human)
Match: KCD16 (BTB/POZ domain-containing protein KCTD16 OS=Homo sapiens GN=KCTD16 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-23
Identity = 76/282 (26.95%), Postives = 120/282 (42.55%), Query Frame = 0 
Query:   66 FPPINTNAASLLISDSIELNVGGTVYTTTGWILAREHTSWLAKNLESM------AMLDRRGRYFIDRDGGLFRYILEYLGTGEIRIPNDFPDIESLRKEATFYGLKIMKRMLDKHLINQ--------DNWDPNKGH------------------YITLTEHATYNVKFRDNLNVVFKRISSITVAGHVKSCRKVFGNKLSLDRDSNENLDRYSCRMLIVQGNEMTVFDVLKENNYEMVSNNKTDAASLGRTGLGERRGSLADLSFEQNKRWIHVTNYYFRRK 315
            +P    +A      + +ELNVGG VY T    L     S L K              D +GR+FIDRDG LFRYIL+YL   ++ +P+ FP+   L++EA ++ L  + ++L    I Q        D  D ++G                   +IT+    +  +      +  F+R+  I V G +   ++VFG  L+  RD +   +RY+ R  +   +    FD+L E  + MV+ N +  AS                 +  +K W   T Y F R+
Sbjct:   11 YPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFIN-------------QYTDDKIWSSYTEYVFYRE 279
The following BLAST results are available for this feature:
BLAST of TCONS_00035631-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCD161.068e-2326.95BTB/POZ domain-containing protein KCTD16 OS=Homo s... [more]
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