TCONS_00035482-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035482-protein
Unique NameTCONS_00035482-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035482-protein ID=TCONS_00035482-protein|Name=TCONS_00035482-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MEFPKLGEHCALLSCKQLDFLPFNCDACSKIFCKDHVSYEKHQCGPGLLK
DRKVPVCPLCNQPVSLSATENPDRKVNEHIENDCKSDLAKHRRSGKCNVK
GCKKRELIPVKCDRCQRNFCLRHRHEADHDCKPDHLTRTHQSSADRQAGL
AAVNRFQASYHLPSNPSNISR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020744XLOC_020744Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035482TCONS_00035482Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 10..50
e-value: 9.7E-4
score: 28.4
coord: 97..136
e-value: 3.6E-6
score: 36.5
IPR000058Zinc finger, AN1-typeGENE3D4.10.1110.10coord: 1..54
e-value: 4.4E-15
score: 54.9
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 10..45
e-value: 3.5E-11
score: 43.0
coord: 97..134
e-value: 1.7E-12
score: 47.2
IPR000058Zinc finger, AN1-typeGENE3D4.10.1110.10coord: 68..154
e-value: 3.9E-16
score: 58.4
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 7..53
score: 7.618
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 54..139
score: 8.138
IPR000058Zinc finger, AN1-typeSUPERFAMILY118310AN1-like Zinc fingercoord: 89..138
IPR000058Zinc finger, AN1-typeSUPERFAMILY118310AN1-like Zinc fingercoord: 3..54

Blast
[Close]
BLAST of TCONS_00035482-protein vs. Swiss-Prot (Human)
Match: ZFN2B (AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.523e-57
Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 0 
Query:    1 MEFPKLGEHCALLSCKQLDFLPFNCDACSKIFCKDHVSYEKHQCGPGLLKDRKVPVCPLCNQPVSLSATENPDRKVNEHIENDCKSDLAKHRR---SGKCNVKGCKKRELIPVKCDRCQRNFCLRHRHEADHDCKPDHLTRTHQSSADRQAGLAAVNRFQASYHLPSNPS 167
            MEFP LG HC+  SC++LDFLP  CDACS IFC DHV+Y +H CG    KD +VPVCPLCN PV ++  E PDR V EHI+ DC+SD A+ +R   + KC   GC++RE++ + C+RC RNFC++HRH  DHDC  +     H +S   +AGLAA++R QA     + PS
Sbjct:    1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGE----GHPTS---RAGLAAISRAQAVASTSTVPS 163
The following BLAST results are available for this feature:
BLAST of TCONS_00035482-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFN2B3.523e-5751.76AN1-type zinc finger protein 2B OS=Homo sapiens GN... [more]
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