TCONS_00035351-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035351-protein
Unique NameTCONS_00035351-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035351-protein ID=TCONS_00035351-protein|Name=TCONS_00035351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
DDINLLKSQVKALSNKLTQATKMITETNQKLSLTNQKLAHVTQENRYLTM
KDQVQNGVCHFSTNPCEPCFCVEDYSVVEKYYCDCRAQPIRRDYKEHYDQ
GERISGLYVINKNAYSLAVQVYCDHVTDGGGWTVLQRRVDGSENFYRNWT
EYEIGFGRLNREFWLGNENLYRLTAQAFMKGSEVRFDMQKRGSSSLMWAK
YSNFEVTSKSTGYELHISGYSGNAGDHMTYHNGAKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020645XLOC_020645Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035351TCONS_00035351Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..30
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 89..236
e-value: 8.4E-22
score: 88.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 91..235
e-value: 7.9E-41
score: 140.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 85..236
score: 34.638
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 85..236
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 3..236
e-value: 2.3E-53
score: 180.6

Blast
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BLAST of TCONS_00035351-protein vs. Swiss-Prot (Human)
Match: MFAP4 (Microfibril-associated glycoprotein 4 OS=Homo sapiens GN=MFAP4 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.517e-34
Identity = 67/181 (37.02%), Postives = 110/181 (60.77%), Query Frame = 0 
Query:   62 STNPCEPCFCVEDYSVVEKYYCDCRAQPIRRDYKEHYDQGERISGLYVINKNAYSLAVQVYCDHVTDGGGWTVLQRRVDGSENFYRNWTEYEIGFGRLNREFWLGNENLYRLTAQAFMKGSEVRFDMQKRGSSSLMWAKYSNFE-----VTSKSTGYELHISGY-SGNAGDHMTYHNGAKF 236
            ST PC P         +E++   C  QP+  D  + Y QG +  G+Y+I  +  S+ V V+CD  T+GG WTV Q+R +GS +F+R W +Y++GFGR + E+WLG +N++ LT +   +  E+R D++    ++  +AKY++F      V+++  GY L ++G+  G AGD ++YH+G KF
Sbjct:   14 STPPCAPQVSGIRGDALERF---CLQQPL--DCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGLQNMHLLTLK---QKYELRVDLEDF-ENNTAYAKYADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQKF 185
The following BLAST results are available for this feature:
BLAST of TCONS_00035351-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFAP41.517e-3437.02Microfibril-associated glycoprotein 4 OS=Homo sapi... [more]
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