TCONS_00035291-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035291-protein
Unique NameTCONS_00035291-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length512

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035291-protein ID=TCONS_00035291-protein|Name=TCONS_00035291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MMSDQTNQQIINEKTTIPSTQSSGQTPVFATPSPSALPVTVSLNTSSCSM
LTSPVHVTPLTSPKVEFLKHSEGHLSVASLNKTGGNASSTSSTPAVTPLS
QQRRSSSRSIKRPKFDDELVETSGLKRSSSRKNSESSPSDTRSRKSISKQ
TSSLQPKKKLKKIKAKPVPVDFGRWRPTDDLALIVAVSQTCDLQSVFLGI
RFSCHFTLKEVQDRWFALLYDPLVSKLAQQSIKALPAEVVEKVTVKSALW
SKDEDQLLADISQEDNYDLNDFQTLLDENPTTFHRSRTAAILEDHWKLLR
HYHLLSSQLAKNINSTVCTLQDMENRLVDDQINRSEDDELNQELSFTDRA
HKREIRRLEQEIPQWEVMLEKSGYIEDLEVSTFPEDTLAVLKGRILKFHI
VKETTYIGRRNLDFDIDVDLSVEGPALKISRRQGVLKLVNGRFHLENCGR
RPFYINGQPLASGASTTLMNNSVIEIYCTKLLFNVNQKAVQKRNENNQSE
GRSRTNLNSNLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020602XLOC_020602Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035291TCONS_00035291Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR025999MCRS_N
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 404..460
e-value: 0.0019
score: 27.5
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 407..476
e-value: 2.1E-4
score: 21.5
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 405..460
score: 8.926
IPR025999Microspherule protein, N-terminal domainPFAMPF13325MCRS_Ncoord: 174..369
e-value: 9.0E-67
score: 224.9
NoneNo IPR availableGENE3D2.60.200.20coord: 388..510
e-value: 7.3E-13
score: 48.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..512
NoneNo IPR availableCDDcd00060FHAcoord: 387..486
e-value: 2.08528E-6
score: 44.6846
IPR008984SMAD/FHA domainSUPERFAMILY49879SMAD/FHA domaincoord: 388..485

Blast
[Close]
BLAST of TCONS_00035291-protein vs. Swiss-Prot (Human)
Match: MCRS1 (Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 4.804e-100
Identity = 180/430 (41.86%), Postives = 251/430 (58.37%), Query Frame = 0 
Query:   84 GGNASSTSSTPAVTPLSQQRRSSSRSIKRPKFDDELVETSGLKRSSSRKNSESSPSDTRSRKS------------------ISKQTSSLQPKKKLKKIKAKPVPV--DFGRWRPTDDLALIVAVSQTCDLQSVFLGIRFSCHFTLKEVQDRWFALLYDPLVSKLAQQSIKALPAEVVEKVTVKSALWSKDEDQLLADISQEDNYDLNDFQTLLDENPTTFHRSRTAAILEDHWKLLRHYHLLSSQLAKNI--NSTVCTLQDMENRLVDDQINRSEDDELNQELSFTDRAHKREIRRLEQEIPQWEVMLEKSGYIEDLEVSTFPEDTLAVLKGRILKFHIVKETTYIGRRNLDFDIDVDLSVEGPALKISRRQGVLKLV-NGRFHLENCGRRPFYINGQPLASGASTTLMNNSVIEIYCTKLLFNVNQKAV 490
             G   ++S      P   +RRSSSR IKR KFDDELVE+S L +SS+R    S     R   S                        +    K++KK K +P+ V  D GRW+P DDL LI AV QT DL SV LG++FSC FTL+EVQ+RW+ALLYDP++SKLA Q+++ L  E +  +  K AL+SK E+QLL+ +       L  FQ LL  +P  F+ +RTA  L+ HW+L++ Y+LL  Q  + +     V    D E+ + D ++    D+ L  EL   DR  KREIR+LEQE+ +W+V+++    I  +    F   TLAVL+GR++++ +      +GR   D  IDVDLS+EGPA KISR+QGV+KL  NG F + N GRRP YI+G+P+  G+   L NNSV+EI   + +F +NQ  +
Sbjct:   29 AGQKRASSQALGTIP---KRRSSSRFIKRKKFDDELVESS-LAKSSTRAKGASGVEPGRCSGSEPSSSEKKKVSKAPSTPVPPSPAPAPGLTKRVKKSK-QPLQVTKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSK-ALFSKAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQVLNFSDAEDLIDDSKLKDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDS---ITGMSSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449
The following BLAST results are available for this feature:
BLAST of TCONS_00035291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCRS14.804e-10041.86Microspherule protein 1 OS=Homo sapiens GN=MCRS1 P... [more]
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