TCONS_00035290-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035290-protein
Unique NameTCONS_00035290-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035290-protein ID=TCONS_00035290-protein|Name=TCONS_00035290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MDLSKTPDAEKVRLSRIYFRGGFAFLPFLWFINTIWFFKVAFFNEQFEGQ
NEIKKNVIRSGIGALVWIIGIAVWVVIYRTNRASWGATGDAISFLIPLGE
P
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020601XLOC_020601Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035290TCONS_00035290Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019379Gamma_Secretase_Asp_P_PEN2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPFAMPF10251PEN-2coord: 8..99
e-value: 2.4E-35
score: 120.7

Blast
[Close]
BLAST of TCONS_00035290-protein vs. Swiss-Prot (Human)
Match: PEN2 (Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=PSENEN PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.525e-31
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0 
Query:    1 MDLSKTPDAEKVRLSRIYFRGGFAFLPFLWFINTIWFFKVAFFNEQFEGQNEIKKNVIRSGIGALVWIIGIAVWVVIYRTNRASWGATGDAISFLIPLGEP 101
            M+L +  + EK+ L R Y+ GGFAFLPFLW +N  WFF+ AF    +  Q++IK  V RS +G L W+I +  W+ I++  R  WGA GD +SF IPLG P
Sbjct:    1 MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLFWVIVLTSWITIFQIYRPRWGALGDYLSFTIPLGTP 101
The following BLAST results are available for this feature:
BLAST of TCONS_00035290-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEN24.525e-3147.52Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=P... [more]
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