TCONS_00035253-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035253-protein
Unique NameTCONS_00035253-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length217

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035253-protein ID=TCONS_00035253-protein|Name=TCONS_00035253-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
MQIDSNKTQHSTLGIPSQREPFKMSIETIKVIEEKLAKNRNHTGPERRKR
TGSFFDDGCPDVALKSLFRKYDVNRDGQLSRDEIQVLFKEDLGLTDEQSE
VYLYILDQDDDGTVSWEEFLFWMRSKERLQNVTDQVRYKLIRQALDLFQS
YDRDHNFSLDKEELKTVLINSGGNAENIEIALQQLDKDHNGNVSFLEFLG
WLNWIPTGQLFFEHIKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020572XLOC_020572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035253TCONS_00035253Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 98..126
e-value: 40.0
score: 4.9
coord: 143..171
e-value: 2.3
score: 14.8
coord: 63..91
e-value: 0.0029
score: 26.9
coord: 177..205
e-value: 25.0
score: 6.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 145..201
e-value: 4.0E-10
score: 39.9
coord: 63..124
e-value: 8.9E-11
score: 42.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..94
score: 11.333
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 106..129
score: 9.157
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 173..208
score: 10.72
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 139..172
score: 5.336
IPR002048EF-hand domainCDDcd00051EFhcoord: 64..124
e-value: 4.66746E-8
score: 46.7721
NoneNo IPR availableGENE3D1.10.238.10coord: 111..159
e-value: 1.1E-10
score: 40.7
NoneNo IPR availableGENE3D1.10.238.10coord: 78..110
e-value: 9.6E-12
score: 44.4
NoneNo IPR availableGENE3D1.10.238.10coord: 22..77
e-value: 0.0016
score: 18.1
NoneNo IPR availableGENE3D1.10.238.10coord: 160..209
e-value: 9.0E-11
score: 41.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 72..84
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 186..198
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 107..119
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 64..202

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035253-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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