TCONS_00035149-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035149-protein
Unique NameTCONS_00035149-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length455

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035149-protein ID=TCONS_00035149-protein|Name=TCONS_00035149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
DFIDFRKAGGVSDNTLRLFTVVEVYLRRATENLRKRKNLECNRNLDLETL
IARNSWATLEEMEEVIPFHMKQFKTVIQKCSSSEKSRFLTKGELVFSIRF
ITTLLFLRVKCSRPMTFQFLTVDMVNKARTNGGFVDQKEFKTASRYIFDT
LILTDDTIEIIDLYLEYIRPRLNPQCDFLLLSTNGTQFQSLTSAMTILVH
QAIGKHINPTRYRQIVETESSERLNHEELHFITEDQKHSSTVAKVHYKKT
QSRIVAVEGRKCMEKMTKEARGNKSLVELFNNVSGSFDEKVLFQSQRIID
DQSTSSSSGNVQPMNDDPFQPTNDDPFQPTNDDPYQPMNESLNESTDLAV
TKVRHTDNTITGTTASKVKTTEMPNDDITFKREIATQQATKRTTKNVKFT
SEEDRYLKQGIQKYGPKSWALILKDTSLKFHSTRTRDSLRVRADSACFRK
LFLSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020493XLOC_020493Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035149TCONS_00035149Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 395..449
e-value: 3.7E-4
score: 29.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 398..441
e-value: 1.2E-5
score: 25.2
NoneNo IPR availableGENE3D1.10.10.60coord: 386..451
e-value: 3.6E-8
score: 32.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..341
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 397..440
e-value: 4.47401E-9
score: 51.4139
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 391..451
score: 10.762
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 395..442

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035149-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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