TCONS_00029365-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00029365-protein
Unique Name	TCONS_00029365-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1015

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00029365-protein ID=TCONS_00029365-protein|Name=TCONS_00029365-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1015bp
ECLPMYTRKSREQRARLGQQSQAPINCYRRHLTIQTGTLWIDGPRDSDNL
RRLTRIVSTDVAPKMDPSLHTVTEEDEQSTSNSTSNCQSLHDLTVTNDLG
SAEDEILSSLSTLVFEFLSSKDTKQKIDSDLINTNFEQVCEIVNYFGHAM
GFEPTNSSWKANKAMNTKRFRKNPIFVSFLMNLPYLLDGNVERGKLFLPL
ALVVMETCIKPKPTEPINQSTTTLSSLESHLLNAWIMSLLVILYKYPIQE
NSTTRETIWTLMSVVKNTLDGHGHHVCSGKIQQQVMSMRNVVHLKMNLKT
VFKKHDQTKQTNSSGGGSALGSHHHQNGEIEMTDFSGDGGHHDQTASALN
STDMGDNRLSRPASELFLGIPDTTEELLVETNQQNCQRCKMTLFNHSEEI
INSCLISLLTYVHMDPERSASFIVDLVKSVVWKAQVMPTSGTCKLPKLGL
TNTASIAQQFLRCVFAKMAQSRLFPELFGAEKYDEDFFMIITTVLTEFPF
LSLLEPIKLILQDFMQPESQINKERYMILRNLSGYIEKMVDGKHIAHKEW
NSLKSTFQSFFSNVENLLPKGRDMDCLLNIMTLLLTHQHRSVKFLMEELE
NAMTFIIKHCKFSVQALYNLTSSTVVSSKEKDQSKLSRDQMKLTRKVAFL
LANTLAGKGSLPEVSLTKLVQFFCHDAGTKYHFDDVNNELTPNTFKPRAV
ECLDINSSSEIIEYLKNPCKRIIKELNDNENYNYFSNLKLALYQFVSVYL
NNIDSKILRDSRFYYKLSAVLLTEISQERQQAASISEMHEHATHFRIYSW
LLLGAINHSVVMETPISRLIPLVKAAYISEYLNVVFDVLRKELSEDVLKK
SKTRAMLQLSFYLMQIWNVYIELHYEGMENQDNQSIHPSANLKPITVIKE
FWSKITPSLYSLLKHSQKMKLESIPLFLQVVENLSLHCPKTFSQLYPMWK
PLLEIYSNEVPSSARQRIKEFDNLPSERRNVPRGDSLSYWVSDIRKKLWN
AERLTKGKLAQVVNV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_016746	XLOC_016746	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00029365	TCONS_00029365	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..88

Blast

[Close]

BLAST of TCONS_00029365-protein vs. Swiss-Prot (Human)
Match: UNC79 (Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 1.482e-39
Identity = 175/672 (26.04%), Postives = 312/672 (46.43%), Query Frame = 0

Query:  362 PASELFLGIPDTTEELLVETNQQNCQRCKMTLFNHSEEIINSCLISLLTYVHMDPERSASFIVDLVKSVVWKAQVMPTSGTCKLPKLGLTNTASIAQQFLRCVFAKMAQSRLFPELFGAEKYDEDFFMIITTVLTEFPFLSLLEPIKLILQDFMQPESQINKERYMI--LRNLSGYIEKM-VDGKHIAHKEWNSLKSTFQSFFSNVENLLPKGRDMDCLLNIMTLLL-THQHRSVKFLMEELENAMTFIIKHCKFSVQALYNLTSSTVVS-SKEKDQSKLSRDQMKLTRKVAFLLANTLAGKGSLPEVSLTKLVQFFCHDAGTKYHFDDVNNE---LTPNTFKPRAVEC--------LDINSSSEIIEYLKNPCKRIIKELNDNENYNYFSNLKLALYQFVSVYLNNIDSKILRDSRFYYKLSAVLLTEISQERQQAASISEMHEHATHFRIYSWLLLGAINHSVVMETPISRL--IPLVKAAYISEYLNVVFDVLRKELSEDVLKKSKTRAMLQLSFYLMQIWNVYIELHYEGMENQDNQSIHPSANLKPITVIKEFWSKITPSLYSLLKHSQKMKLESIPL-FLQVVENLSLHCPKTFSQLYPMWKPLLEIYSNEVPSSARQRIKEFDNLPSER--RNVPRGDSLSYWVSDIRKKLWNAERLTKGKLAQV 1012
            PA E F     T E+  V T++  C  C   L  + EE +   ++ L T++H+ P+ +A  ++D+++SV   A     S   +   +   N A +A+QFLRC+F ++A + +FP+LF +   D  F   + + L +F  LS +  +  +L+  +  +  +     MI  L N++ ++E + +D        W ++ + FQ+FF+ +  +LP    +D  L IM  LL      + + L+E     ++F+I++  F++  L  L      + +KE       RD+  L+R V   L   L  K  LP+ +L  LVQF C DAGTK     + ++    +       A+EC        LD  +    +  LK+  K   + L+++    +  +LK+ L Q  ++   +I     RD++   +    L    S  +Q      E  E  +H R+ SWLLLG++ H+ V     S    IPL   ++++++L V+     ++    VL        L  +F   Q+W VY E        Q+      +A L  +    EFWS++TPS+  L+ H++ M +E + L  + ++E L       F +L PMW P+++     + +  + R++   N  +    R +P     S  ++ +RK L    + T+ K+AQV
Sbjct: 1991 PAPEEF-----TDEQPTVMTDK--CHDCGAILEEYDEETLGLAIVVLSTFIHLSPDLAAPLLLDIMQSVGRLASSTTFSNQAE-SMMVPGNAAGVAKQFLRCIFHQLAPNGIFPQLFQSTIKDGTFLRTLASSLMDFNELSSIAALSQLLEG-LNNKKNLPAGGAMIRCLENIATFMEALPMDS---PSSLWTTISNQFQTFFAKLPCVLPLKCSLDSSLRIMICLLKIPSTNATRSLLEPFSKLLSFVIQNAVFTLAYLVELCGLCYRAFTKE-------RDKFYLSRSVVLELLQALKLKSPLPDTNLLLLVQFICADAGTKLAESTILSKQMIASVPGCGTAAMECVRQYINEVLDFMADMHTLTKLKSHMKTCSQPLHED---TFGGHLKVGLAQIAAM---DISRGNHRDNKAVIRYLPWLYHPPSAMQQGP---KEFIECVSHIRLLSWLLLGSLTHNAVCPNASSPCLPIPLDAGSHVADHLIVILIGFPEQSKTSVLHMCS----LFHAFIFAQLWTVYCEQSAVATNLQNQNEFSFTAILTAL----EFWSRVTPSILQLMAHNKVM-VEMVCLHVISLMEALQECNSTIFVKLIPMWLPMIQSNIKHLSAGLQLRLQAIQNHVNHHSLRTLPGSGQSSAGLAALRKWL----QCTQFKMAQV 2621

The following BLAST results are available for this feature:

BLAST of TCONS_00029365-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00029365-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UNC79	1.482e-39	26.04	Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE...	[more]

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TCONS_00029365-protein (polypeptide) - C. hemisphaerica