TCONS_00028786-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028786-protein
Unique NameTCONS_00028786-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length477

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028786-protein ID=TCONS_00028786-protein|Name=TCONS_00028786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MDRGGSAAEQKLAEKLVILNNRGLGMLTRIYNIKKACQDPKSRPSFLNDK
SLEQALKIIVRKFPVMENSKASHMQPVMQMHMDVVKGLSNYYFTFVDVMI
FKDHASELLTSIDASFVHFDISLNFELTKAYFDLITTYACLFVLISKVDD
RKAVLSLFNHAHEMQKGHGESNFPRLGQLIIDYEVPFKKLSEEFTPHAQR
VGIALSSLNLLYKRRHLGGEQMRQAQILSLTSMPQQMLSPALSETVPCEY
LSMETMTKWILFAYTLCPSQITAVSNAGEVWKMCLQDGFCMTLFRDEVLY
IHKELQTLFESIKGQNKRTKEVQDCLAHSLQTSANFHRERRKYLITAMDE
MIAILSDQPGLLGPKVLVALLGMSHARDEIYWLLRHKYHPPPKGKKIAQD
DYEDERLPKLLYCVLELQELFKKYSKVIQRYFIQYLSGFDVALLKTIIQV
TFYVNKKSDGLVASASLKTGIFHLVSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016327XLOC_016327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028786TCONS_00028786Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019137Nck-associated_protein-1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019137Nck-associated protein 1PFAMPF09735Nckap1coord: 9..455
e-value: 2.9E-182
score: 608.3

Blast
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BLAST of TCONS_00028786-protein vs. Swiss-Prot (Human)
Match: NCKP1 (Nck-associated protein 1 OS=Homo sapiens GN=NCKAP1 PE=1 SV=1)

HSP 1 Score: 483.797 bits (1244), Expect = 1.289e-160
Identity = 226/463 (48.81%), Postives = 325/463 (70.19%), Query Frame = 0 
Query:    8 AEQKLAEKLVILNNRGLGMLTRIYNIKKACQDPKSRPSFLNDKSLEQALKIIVRKFPVMENSKASHMQPVMQMH-MDVVKGLSNYYFTFVDVMIFKDHASELLTSIDASFVHFDISLNFELTKAYFDLITTYACLFVLISKVDDRKAVLSLFNHAHEMQKGHGESNFPRLGQLIIDYEVPFKKLSEEFTPHAQRVGIALSSLNLLYKRRHLGGEQMRQAQILSLTSMPQQMLSPALSETVPCEYLSMETMTKWILFAYTLCPSQITAVSNAGEVWKMCLQDGFCMTLFRDEVLYIHKELQTLFESIKGQNKRTKEVQDCLAHSLQTSANFHRERRKYLITAMDEMIAILSDQPGLLGPKVLVALLGMSHARDEIYWLLRHKYHPPPKGKKIAQDDYEDERLPKLLYCVLELQELFKKYSKVIQRYFIQYLSGFDVALLKTIIQVTFYVNKKSDGLVASASLKT 469
            ++QKLAEKL ILN+RG+GMLTR+YNIKKAC DPK++PS+L DK+LE A+K IVRKFP +E    +     +Q    +++K L+ YYFTFVDVM FKDH  ELL +ID   V FDI++NF+LTK Y DLI TY  L +L+S++++RKA++ L+N+AHEM  G  +  +PRLGQ+I+DYE P KK+ EEF PH++ +  AL SL ++Y RR+L  +Q R AQ+LSL S P  ML+PA S+T+PCEYLS++ M KWI+F + LC   +   + A  +WK+ LQ   C++LFRDEV +IHK  + LF +I+G NKR  ++++C   ++  + + HRERRK+L +A+ E+  +LSDQPGLLGPK L   + +S ARDEI WLLRH  + P K    + DD+ D+ + +L++ + EL+   +KY  V+QRY++QYLSGFD  +L  ++Q    V  + + ++ S+ + T
Sbjct:    9 SQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKK----SADDFIDKHIAELIFYMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQ-NLSVCPEDESIIMSSFVNT 466
The following BLAST results are available for this feature:
BLAST of TCONS_00028786-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCKP11.289e-16048.81Nck-associated protein 1 OS=Homo sapiens GN=NCKAP1... [more]
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