TCONS_00028529-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028529-protein
Unique Name	TCONS_00028529-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1076

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028529-protein ID=TCONS_00028529-protein|Name=TCONS_00028529-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1076bp
MMGDPIPTNDSDMVELKTIGSTPSSPESPSSNGNLLHPKAANSPPPLKTT
GAGKHARFNIEKVDSPTTTEANTAHNQNTIHDMDTIGYATHEAVPLTMFY
RNEASVPGHAKTRPTLEELHKGFDELDEIEAEDGSPPKEKERLIEEGSKV
IPRGGSLKFGWVKGVLVPCLLNIWGVILYLRLPLLTGQSGILLISAIILL
SACVTTITTLSMSAICTNGEVKGGGAYYLISRALGPEFGGSIGIIFSLAN
AVGVALYVVGFGETVQQLMQNNGLTMVDKYNDVRIIGVIVICVLLGVTLI
GLDWVIKTQLGLLLILILSMINYVVGCFSGSVLTDLDEQKLQGFTSFSTQ
TFKDNLYPEFRSGIEGGSFFASFSIFFPAATGILAGVNISGDLKDPGYAI
PKGTFTAIVLTTAVYIALAWMIGASTMKDAAGALAPVLAAANGTQNSNNQ
TVRPVGNTTDSRGLDWCVPNCDYGLLNDVQAMERFSLVGHLVLAGIFAAT
LSSALASLVGSPKTFQAVCRDGIFKGLGFFGKGSGPNDEPRRAYVLTFLI
STGFILIGELNVIAPIISNFFLMSYALINYSVFAASLGRSPGWRPSFKYY
NMWLSLLGCFLCIGIMFLINWWAALVTIVIIMTLYKYVDYKKPEINWGSS
GQAHTYIKALKLAHSLNRTDEHVKNFRPQCLVLTGAPSSRPNLTLLVSHL
TRHVGLMICGQVIVKADGIADTSTVNQEKFLRQKKLKGFVSVTAAPSLRL
GAQALMQCSGLGKLRPNIVVIGYKNDWQTDDMEKVNGYINILHDAFEGKL
SVALLRTPQKAKGGFLDEEYDDDEYDEELEMNMNSFRNEAAMNPPIVLDY
DNENDDEGDRSALESQAPTPNIKRSSTRKKKDSGTPNMNGDREQRSDTIL
TMDENVTGHIDVWWLYDDGGLTILLPYLLSRNKKYKGCSLRVLTPTSDKK
LKSNQVRMASLLKKFRITFSGIVEVVGINSKPASQSIEKFRQTRIKDELS
ENEPLDKKTLRQIRLGELVREHSRNSKLVVLTMPIPRKSVVSNLMYMSWL
ETISEDLDAEMLFVRGNQTSVLTFYS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_016172	XLOC_016172	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028529	TCONS_00028529	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002443	Na/K/Cl_cotranspt
IPR004842	SLC12A_fam
IPR018491	SLC12_C
IPR013612	AA_permease_N
IPR004841	AA-permease/SLC12A_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity
GO:0015377	cation:chloride symporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006811	ion transport
GO:0006810	transport
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015377	cation:chloride symporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002443	Na/K/Cl co-transporter	PRINTS	PR01207	NAKCLTRNSPRT	coord: 471..481 score: 54.55 coord: 625..636 score: 46.67 coord: 220..228 score: 78.89
IPR004842	SLC12A transporter family	TIGRFAM	TIGR00930	TIGR00930	coord: 90..1076 e-value: 0.0 score: 1034.8
IPR018491	SLC12A transporter, C-terminal	PFAM	PF03522	SLC12	coord: 690..1076 e-value: 4.0E-104 score: 348.9
IPR013612	Amino acid permease, N-terminal	PFAM	PF08403	AA_permease_N	coord: 81..135 e-value: 4.9E-10 score: 38.7
IPR004841	Amino acid permease/ SLC12A domain	PFAM	PF00324	AA_permease	coord: 164..681 e-value: 3.2E-107 score: 359.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 846..897
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54

Blast

[Close]

BLAST of TCONS_00028529-protein vs. Swiss-Prot (Human)
Match: S12A2 (Solute carrier family 12 member 2 OS=Homo sapiens GN=SLC12A2 PE=1 SV=1)

HSP 1 Score: 850.507 bits (2196), Expect = 0.000e+0
Identity = 474/1046 (45.32%), Postives = 665/1046 (63.58%), Query Frame = 0

Query:   76 NQNTIHDMDTIGYATHEAVPLTMFYRNEASVPGHAKTRPTLEELHKGFDELDEIEAEDGSPPKEKERLIEEG--SKVIPRGGSLKFGWVKGVLVPCLLNIWGVILYLRLPLLTGQSGILLISAIILLSACVTTITTLSMSAICTNGEVKGGGAYYLISRALGPEFGGSIGIIFSLANAVGVALYVVGFGETVQQLMQNNGLTMVDKYNDVRIIGVIVICVLLGVTLIGLDWVIKTQLGLLLILILSMINYVVGCFSGSVLTDLDEQKLQGFTSFSTQTFKDNLYPEFRSGIEGGSFFASFSIFFPAATGILAGVNISGDLKDPGYAIPKGTFTAIVLTTAVYIALAWMIGASTMKDAAGALAPVLAAANGTQNSNNQTVRPVGNTTDSR---GLDW--CVPN-CDYGLLNDVQAMERFSLVGHLVLAGIFAATLSSALASLVGSPKTFQAVCRDGIFKGLGFFGKGSGPNDEPRRAYVLTFLISTGFILIGELNVIAPIISNFFLMSYALINYSVFAASLGRSPGWRPSFKYYNMWLSLLGCFLCIGIMFLINWWAALVTIVIIMTLYKYVDYKKPEINWGSSGQAHTYIKALKLAHSLNRTDEHVKNFRPQCLVLTGAPSSRPNLTLLVSHLTRHVGLMICGQVIV--KADGIADTSTVNQEKFLR---QKKLKGFVSVTAAPSLRLGAQALMQCSGLGKLRPNIVVIGYKNDWQTDDMEKVNGYINILHDAFEGKLSVALLRTPQKAKGGFLDEEYDDDEYDEELEMNMNSFRNEAAMNPPIVLDYDNENDDEGDRSALESQAPTPNIKRSSTR-------KKKDSG--TPNMNGDREQRSDTILTMDENVTGHIDVWWLYDDGGLTILLPYLLSRNKKYKGCSLRVLTPTSDKKLKSNQVRMASLLKKFRITFSGIVEVVGINSKPASQSIEKF-------------RQTRIKDELSENEP----------LDKKTLRQIRLGELVREHSRNSKLVVLTMPIPRKSVVSNLMYMSWLETISEDLDAEMLFVRGNQTSVLTFYS 1076
            + NT + + T G+ T +AVP    YR+ A+  G    RP+L ELH   DEL++   EDG    E+     +   +      G +KFGW+KGVLV C+LNIWGV+L++RL  + GQ+GI L   +I+++  VTTIT LS SAI TNG V+GGGAYYLISR+LGPEFGG+IG+IF+ ANAV VA+YVVGF ETV +L++ + + M+D+ ND+RIIG I + +LLG+++ G++W  K Q+ LL+IL+L++ ++V+G F       L+ +K +GF  + ++ F +N  P+FR   E  +FF+ F+IFFPAATGILAG NISGDL DP  AIPKGT  AI++TT VY+ +A  +G+  ++DA G             N N+  V  + N T +      D+  C  + C YGL+N+ Q M   S    L+ AGIF+ATLSSALASLV +PK FQA+C+D I+     F KG G N+EP R Y+LTFLI+ GFILI ELNVIAPIISNFFL SYALIN+SVF ASL +SPGWRP+FKYYNMW+SLLG  LC  +MF+INWWAAL+T VI++ LY YV YKKP++NWGSS QA TY+ AL+ +  L+  ++HVKNFRPQCLV+TGAP+SRP L  LV   T++VGLMICG V +  +   + + S ++Q K+ R   + K+K F +   A  LR GAQ LMQ +GLG+++PN +V+G+K DW   DM  V+ YIN+ HDAF+ +  V ++R         L E  D      + E+  +  ++    +  + ++Y  ++D +  +  L  +  T  ++    +       KK+  G   P    D++    +     +     IDVWWL+DDGGLT+L+PYLL+  KK+K C +RV       ++  ++  MA+LL KFRI FS I+ +  IN+KP  ++I  F             ++  I D++ E+EP             KT RQIRL EL++EHS  + ++V+++P+ RK  VS+ +YM+WLE +S+DL   +L VRGN  SVLTFYS
Sbjct:  204 HTNTYY-LRTFGHNTMDAVPRIDHYRHTAAQLGEKLLRPSLAELH---DELEKEPFEDGFANGEESTPTRDAVVTYTAESKGVVKFGWIKGVLVRCMLNIWGVMLFIRLSWIVGQAGIGLSVLVIMMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGAIGLIFAFANAVAVAMYVVGFAETVVELLKEHSILMIDEINDIRIIGAITVVILLGISVAGMEWEAKAQIVLLVILLLAIGDFVIGTF-----IPLESKKPKGFFGYKSEIFNENFGPDFR---EEETFFSVFAIFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTLVYVGIAVSVGSCVVRDATG-------------NVNDTIVTELTNCTSAACKLNFDFSSCESSPCSYGLMNNFQVMSMVSGFTPLISAGIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLLGAILCCIVMFVINWWAALLTYVIVLGLYIYVTYKKPDVNWGSSTQALTYLNALQHSIRLSGVEDHVKNFRPQCLVMTGAPNSRPALLHLVHDFTKNVGLMICGHVHMGPRRQAMKEMS-IDQAKYQRWLIKNKMKAFYAPVHADDLREGAQYLMQAAGLGRMKPNTLVLGFKKDWLQADMRDVDMYINLFHDAFDIQYGVVVIR---------LKEGLDISHLQGQEELLSSQEKSPGTKDVVVSVEYSKKSDLDTSKP-LSEKPITHKVEEEDGKTATQPLLKKESKGPIVPLNVADQKLLEASTQFQKKQGKNTIDVWWLFDDGGLTLLIPYLLTTKKKWKDCKIRVFIGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENIIAFEEIIEPYRLHEDDKEQDIADKMKEDEPWRITDNELELYKTKTYRQIRLNELLKEHSSTANIIVMSLPVARKGAVSSALYMAWLEALSKDL-PPILLVRGNHQSVLTFYS 1212

The following BLAST results are available for this feature:

BLAST of TCONS_00028529-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028529-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S12A2	0.000e+0	45.32	Solute carrier family 12 member 2 OS=Homo sapiens ...	[more]

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TCONS_00028529-protein (polypeptide) - C. hemisphaerica