TCONS_00028523-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028523-protein
Unique NameTCONS_00028523-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length393

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028523-protein ID=TCONS_00028523-protein|Name=TCONS_00028523-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
QRRFTIFDQSEKFLRRLFITSVQYQLNVNERRRKSCELFVVKFCHSISCS
FKTSVDEALVLCECCSLKFRMEYQSKMQGLYHKLSKYFHTSQPDMAEPHD
APPPNNNTSTTAPNKITKRKLSFMNPFTSRQNSESSIQSPTQETGSITDS
PRQRKSVVTKEQSGLVSDSDPDFGFHEFTMDVIHLEPIRLRNPGLTDMME
TVGTAYTKAKPKLKTMCKCTLNLNTDGINIKQDDHTGSSTVPSRNTSHDG
DGITPATATDLEFLYKVRRMLYCAVDKTHQKVFFFNYQYGSRAENVDLHM
IVCKNPKDAKELAKRVSQLFKKIQIEQHKRDKEKREDHIQSVHRIRTRSN
QNITSSSASSTTGSKDGSCSGTYGSKGSAGEWSVQDRIQLSMA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016169XLOC_016169Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028523TCONS_00028523Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH_dom-like
IPR006020PTB/PI_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH domain-likeGENE3D2.30.29.30coord: 35..334
e-value: 7.7E-9
score: 35.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 199..333
IPR006020PTB/PI domainPFAMPF14719PID_2coord: 252..341
e-value: 3.3E-8
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..253

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028523-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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