TCONS_00028292-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028292-protein
Unique NameTCONS_00028292-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028292-protein ID=TCONS_00028292-protein|Name=TCONS_00028292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MQTRKMERKWEEIHNTTPENLIVETVNFDCKVCGKQFKKSCTLQTHLRIH
EGENPYAYDVFGKGFQESNIFQQQVDVDDSLKLFQCSVCGKKFQFPNNLI
VHAQYHLKNEEVERPETKRKLVFITPEKSNCNQVTEGIKVPNQLDCIINN
SANNPSTSPRKQNSSDLQMFALKCKDQMFIDTFKDKKQHLCKICGKGFMY
LPTLQRHFATHGELKQLQQCADCEKEFEYGRLFNSHLKTNGCKTPYKCSV
CEKKISTHALLSLHSLVHLGEKRYKCGVCDKEFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016031XLOC_016031Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028292TCONS_00028292Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 246..268
e-value: 0.68
score: 19.0
coord: 84..106
e-value: 0.018
score: 24.2
coord: 28..50
e-value: 0.0072
score: 25.5
coord: 189..211
e-value: 0.056
score: 22.6
coord: 218..238
e-value: 260.0
score: 0.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 191..211
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 248..268
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 86..106
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 30..50
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 84..111
score: 11.448
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 28..55
score: 15.417
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 246..273
score: 11.302
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 189..216
score: 10.242
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 27..69
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 229..283
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 82..106
coord: 184..211
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 130..203
e-value: 6.6E-5
score: 22.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 94..129
e-value: 2.0E-5
score: 24.0
NoneNo IPR availableGENE3D3.30.160.60coord: 3..42
e-value: 1.3E-9
score: 37.4
NoneNo IPR availableGENE3D3.30.300.90coord: 230..255
e-value: 1.3E-7
score: 30.9
NoneNo IPR availableGENE3D2.20.28.30coord: 70..93
e-value: 1.8E-5
score: 24.3
NoneNo IPR availableGENE3D3.30.160.60coord: 273..284
e-value: 0.0032
score: 16.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 28..50
e-value: 9.1E-4
score: 19.5
coord: 84..106
e-value: 8.5E-4
score: 19.6
NoneNo IPR availableGENE3D3.30.160.60coord: 43..69
e-value: 3.6E-12
score: 46.0
coord: 204..229
e-value: 6.6E-7
score: 29.1
coord: 256..272
e-value: 3.1E-11
score: 43.0

Blast
BLAST of TCONS_00028292-protein vs. Swiss-Prot (Human)
Match: ZN227 (Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.171e-28
Identity = 85/277 (30.69%), Postives = 123/277 (44.40%), Query Frame = 0
Query:   19 ENLIVETVNFDCKVCGKQFKKSCTLQTHLRIHEGENPYAYDVFGKGFQESNIFQQQVDVDDSLKLFQCSVCGKKFQFPNNLIVHAQYH-----LKNEEVERPETKRKLVFI-----TPEKS-NCNQVTEGIKVPNQLDCIINNSANNPSTSPRKQNSSDLQMFALKCKDQMFIDTFKDKKQHLCKICGKGFMYLPTLQRHFATHGELKQLQQCADCEKEFEYGRLFNSHLKTNGCKTPYKCSVCEKKISTHALLSLHSLVHLGEKRYKCGVCDKEFS 284
            + +  E   + C+ CGK F  S  L+ H R+H GE PY  +  GKGF ++  F     V    K ++C VCGK F   + LI H + H      K E   +  T+   + I     T EK   C +  +G    + L        N  +   R +  +  + F+   K Q        +K + C +CGK F Y   L+ H   H   K   +C +C K F +    ++H + +  + PYKC  C+K  S      +H  VH GEK YKCGVC K FS
Sbjct:  371 QRVHTEEKPYKCEECGKGFGWSVNLRVHQRVHRGEKPYKCEECGKGFTQAAHFHIHQRVHTGEKPYKCDVCGKGFSHNSPLICHRRVHTGEKPYKCEACGKGFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQV----HQNVHTGEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPY-KCEECGKGFSWRSNLHAHQRVHSGEKPYKCEQCDKSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFS 642          

HSP 2 Score: 110.153 bits (274), Expect = 4.947e-27
Identity = 82/267 (30.71%), Postives = 117/267 (43.82%), Query Frame = 0
Query:   27 NFDCKVCGKQFKKSCTLQTHLRIHEGENPYAYDVFGKGFQESNIFQQQVDVDDSLKLFQCSVCGKKFQFPNNLIVHAQYHLKNEEVERPETKRKLVFITPEKSNCNQVTEGIKVPNQLD-CIINNSANNPSTSPRKQNSSDL--------QMFALKCKDQMFIDTFKDKKQHLCKICGKGFMYLPTLQRHFATHGELKQLQQCADCEKEFEYGRLFNSHLKTNGCKTPYKCSVCEKKISTHALLSLHSLVHLGEKRYKCGVCDKEFS 284
            ++ C  CGK F  S  L  H R H GE PY  +  GK F +S+ FQ    V    K ++C  CGK F +  NL VH + H   +  +  E  +   F      + +Q     + P + D C    S N+P    R+ ++ +         + F       +       +K + CK CGKGF     LQ H   H   K+  +C  C K F       +H + +  + PY+C VC K  S  + L LH ++H GEK YKC  C K FS
Sbjct:  323 SYRCDSCGKGFSSSTGLIIHYRTHTGEKPYKCEECGKCFSQSSNFQCHQRVHTEEKPYKCEECGKGFGWSVNLRVHQRVHRGEKPYKCEECGKG--FTQAAHFHIHQRVHTGEKPYKCDVCGKGFSHNSPLICHRRVHTGEKPYKCEACGKGFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQVHQNVHTGEKRF-KCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYKCEECGKGFS 586          

HSP 3 Score: 98.9821 bits (245), Expect = 2.956e-23
Identity = 76/257 (29.57%), Postives = 107/257 (41.63%), Query Frame = 0
Query:   28 FDCKVCGKQFKKSCTLQTHLRIHEGENPYAYDVFGKGFQESNIFQQQVDVDDSLKLFQCSVCGKKFQFPNNLIVHAQYHLKNEEVERPETKRKLVFITPEKSNCNQVTEGIKVPNQLDCIINNSANNPSTSPRKQNSSDLQMFALKCKDQMFIDTFKDKKQHLCKICGKGFMYLPTLQRHFATHGELKQLQQCADCEKEFEYGRLFNSHLKTNGCKTPYKCSVCEKKISTHALLSLHSLVHLGEKRYKCGVCDKEFS 284
            + CK CGK F ++  LQ H  +H GE  +  +  GKGF +S+  Q    V    K ++C VCGK F + +NL +H   H      E+P               C +  +G    + L     +   +    P K    D + F+     ++       +K + C +CGKGF     LQ H   H   K  + C  C K F Y   F  H + +  + PYKC  C K       L  H  VH GEK + C  C K FS
Sbjct:  492 YKCKECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTG----EKP-------------YKCEECGKGFSWRSNLHA---HQRVHSGEKPYKCEQCD-KSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYK-CDVCGKGFRYSSQFIYHQRGHTGEKPYKCEECGKGFGRSLNLRHHQRVHTGEKPHICEECGKAFS 726          
The following BLAST results are available for this feature:
BLAST of TCONS_00028292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2272.171e-2830.69Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 ... [more]
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