TCONS_00028281-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028281-protein
Unique NameTCONS_00028281-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028281-protein ID=TCONS_00028281-protein|Name=TCONS_00028281-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MESLQTVRNTDDNVGGSLIFDEVVIKIEQEDYEEIPDSYCMEEKEARNYT
VCGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGE
KPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHL
RIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAA
HLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEK
SFKRSSYLKRHAFIHTEKPFKCDVCEKRFLRLNYLKTHIASSHKDESPPN
TNLAEKDLEKEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016020XLOC_016020Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028281TCONS_00028281Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 75..97
e-value: 0.0036
score: 26.5
coord: 187..209
e-value: 0.0024
score: 27.1
coord: 270..293
e-value: 0.0089
score: 25.2
coord: 215..237
e-value: 1.9E-4
score: 30.8
coord: 243..265
e-value: 0.0044
score: 26.2
coord: 103..125
e-value: 0.0015
score: 27.8
coord: 131..153
e-value: 3.0E-4
score: 30.1
coord: 159..181
e-value: 0.001
score: 28.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..97
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 189..209
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 105..125
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 217..237
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 245..265
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 133..153
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 161..181
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 272..293
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 131..158
score: 15.895
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..102
score: 15.791
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 103..130
score: 16.436
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 270..298
score: 12.05
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 243..270
score: 12.279
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 215..242
score: 15.646
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 187..214
score: 16.124
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 159..186
score: 15.958
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 84..140
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 196..252
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 49..97
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 140..196
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 237..288
NoneNo IPR availableGENE3D2.40.155.10coord: 207..238
e-value: 1.7E-24
score: 86.8
NoneNo IPR availableGENE3D3.30.160.60coord: 195..206
e-value: 4.5E-8
score: 32.6
coord: 111..122
e-value: 4.6E-13
score: 48.6
NoneNo IPR availableGENE3D3.30.160.60coord: 239..255
e-value: 3.3E-13
score: 49.0
NoneNo IPR availableGENE3D3.30.160.60coord: 256..278
e-value: 4.2E-15
score: 55.3
coord: 172..194
e-value: 3.1E-18
score: 65.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 215..237
e-value: 2.7E-5
score: 24.3
coord: 243..265
e-value: 2.2E-5
score: 24.6
coord: 75..97
e-value: 4.6E-4
score: 20.4
coord: 131..153
e-value: 8.1E-4
score: 19.6
coord: 104..125
e-value: 2.3E-5
score: 24.5
coord: 187..209
e-value: 2.4E-4
score: 21.3
coord: 159..181
e-value: 2.7E-4
score: 21.1
NoneNo IPR availableGENE3D3.30.160.60coord: 152..171
e-value: 4.7E-18
score: 64.6
NoneNo IPR availableGENE3D3.30.160.60coord: 279..312
e-value: 3.4E-7
score: 29.6
NoneNo IPR availablePFAMPF12874zf-metcoord: 270..291
e-value: 0.0013
score: 18.9
NoneNo IPR availableGENE3D2.30.30.380coord: 96..110
e-value: 7.8E-10
score: 38.3
coord: 123..136
e-value: 3.6E-9
score: 36.2
NoneNo IPR availableGENE3D3.30.160.60coord: 137..151
e-value: 8.4E-14
score: 50.9
coord: 82..95
e-value: 1.2E-10
score: 40.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..312
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 38..81
e-value: 1.1E-7
score: 31.5

Blast
BLAST of TCONS_00028281-protein vs. Swiss-Prot (Human)
Match: ZN235 (Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 1.818e-79
Identity = 124/248 (50.00%), Postives = 163/248 (65.73%), Query Frame = 0
Query:   52 CGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTHIASSHKDESP 298
            CGK F+ S + +++  V T  K + C  C K F+  SSF  H R+HTGEKP +C+VCGKGF+QS   Q H R+HTGEKPYKC++C K FN   N   H R+HTGEKP+KC  C K FS++++L+ H   HTGE+PFKCD C++ F  A+HL+ H R HTGEKPYKCD CG+ F+  + L+ H+IIH  E+PFKC+ C K F  S+ L  H  +HT EKP+ C  C K F + ++  TH    H  E P
Sbjct:  464 CGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTH-QRVHTGERP 710          

HSP 2 Score: 253.447 bits (646), Expect = 1.295e-78
Identity = 118/239 (49.37%), Postives = 163/239 (68.20%), Query Frame = 0
Query:   51 VCGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTH 288
            VCGK FT  SH   +  + T  K + C  C K F+  S+   H R+HT EKP KCD CGK F+ S NL +H R+HTGEKPYKC+ C K F+   +F+ H R+HTGEKPF+CNVC K FS+S++ + H   HTGE+P+KC+VC + F ++ +L  H R HTGEKPYKC+ CG+ F+ ++ L+ H+ +H  E+PFKCD C+K F ++S+L+ H  +HT EKP+KCD C K F + + L+ H
Sbjct:  407 VCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVH 645          

HSP 3 Score: 246.899 bits (629), Expect = 4.357e-76
Identity = 122/248 (49.19%), Postives = 160/248 (64.52%), Query Frame = 0
Query:   52 CGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTHIASSHKDESP 298
            CGK F+ S+  N +  V T  K + C +C K FT+RS    H RIHTGEKP KC  CGK F+ S NL TH R+HT EKPYKCD C K F+   N   H R+HTGEKP+KC  C K FS ++  + H   HTGE+PF+C+VC + F  +++ + H R HTGEKPYKC+VCG+ F  S  L  H+ +H  E+P+KC+ C K F ++S L+ H  +HT EKPFKCD C+KRF + ++L+ H    H  E P
Sbjct:  380 CGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAH-QRVHTGEKP 626          

HSP 4 Score: 239.58 bits (610), Expect = 2.215e-73
Identity = 113/229 (49.34%), Postives = 155/229 (67.69%), Query Frame = 0
Query:   52 CGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRF 279
            CGK F+ SS+   +  V T  K + C+ C K F + S    H  IHTGEKP +CD CGKGF++S +L  H R+HTGEKPYKC++C K F    + + H RIHTGEKP+KC  C K+FS S++L  H   HT E+P+KCD C + F  + +L  H R HTGEKPYKC+ CG+ F+++++ + H+ +H  E+PF+C+VC K F +SSY + H  +HT EKP+KC+VC KRF
Sbjct:  324 CGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRF 552          

HSP 5 Score: 229.95 bits (585), Expect = 1.044e-69
Identity = 103/216 (47.69%), Postives = 143/216 (66.20%), Query Frame = 0
Query:   51 VCGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT 266
            VCGK F+ SS+   +  V T  K + C +C K F    +  +H R+HTGEKP KC+ CGKGF+Q+ NLQ H  +HTGEKP+KCD C K F+   + + H R+HTGEKP+KC+ C K FS+ ++L+ H + HTGE+PFKC+ C ++F ++A L  H R HTGEKPY C  CG+ F+ ++    H+ +H  ERP+ CDVC K F + S+L  H  +HT
Sbjct:  519 VCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHT 734          

HSP 6 Score: 224.557 bits (571), Expect = 1.059e-67
Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 0
Query:   68 VQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTHIASSHKDESP 298
            V+T  K + C+ C K F++ S+   H R+HTGEKP  C  CGK FNQS +L  HL IHTGEKPY+CD C K F+   +   H R+HTGEKP+KC VC K F++ +HL+ H   HTGE+P+KC  C + F  +++L  H R HT EKPYKCD CG+ F+ S  L  H+ +H  E+P+KC+ C K F  +S  + H  +HT EKPF+C+VC K F + +Y + H    H  E P
Sbjct:  312 VRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAH-QRVHTGEKP 542          

HSP 7 Score: 206.068 bits (523), Expect = 6.336e-61
Identity = 113/260 (43.46%), Postives = 147/260 (56.54%), Query Frame = 0
Query:   52 CGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTHIASSHKDESPPNTNLAEKDLEK 310
            C + F  SS    +  V    KS  C+   K+ +  S       + TG+K   C  CGKGF+QS NLQTH R+HTGEKPY C  C K FN   +   HL IHTGEKP++C+ C K FS S  L  H   HTGE+P+KC+VC + F   +HL+ H R HTGEKPYKC  CG+ F+ S+ L  H+ +H  E+P+KCD C K F  S  L  H  +HT EKP+KC+ C K F   +  ++H    H  E P   N+  K   +
Sbjct:  268 CEEAFNDSSSLELHKQVHLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSH-QRVHTGEKPFRCNVCGKGFSQ 526          

HSP 8 Score: 179.874 bits (455), Expect = 3.248e-51
Identity = 97/232 (41.81%), Postives = 131/232 (56.47%), Query Frame = 0
Query:   68 VQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTGEKPYKCDVCGRTFTTSTTLRKHKIIHNSERPFKCDVCEKSFKRSSYLKRHAFIHT-EKPFKCDVCEKRFLRLNYLKTHIASSHKDESP 298
            + T  K++  N C + F   SS   H ++H G+K   C    K  + S  +     + TG+K Y C  C K F+   N + H R+HTGEKP+ C+ C K F++S+HL  HL  HTGE+P++CD C + F  +  L  H R HTGEKPYKC+VCG+ FT  + L+ H+ IH  E+P+KC  C K F  SS L  H  +HT EKP+KCD C K F     L +H    H  E P
Sbjct:  256 IHTGQKTYQGNECEEAFNDSSSLELHKQVHLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSH-QRVHTGEKP 486          

HSP 9 Score: 166.777 bits (421), Expect = 1.574e-46
Identity = 80/160 (50.00%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   52 CGKEFTASSHSNNNLLVQTKMKSFNCNICTKEFTRRSSFIDHFRIHTGEKPNKCDVCGKGFNQSGNLQTHLRIHTGEKPYKCDLCHKEFNDVRNFKRHLRIHTGEKPFKCNVCDKQFSESNHLKRHLLSHTGERPFKCDVCKRDFRYAAHLKEHLRTHTG 211
            CGK F+ +S+   +  V T  K F C+ C K F++ S    H R+HTGEKP KCD CGK F+Q  NLQ H  IHTGEKP+KC+ C KEF+       H R+HTGEKP+ C  C K FS+++H   H   HTGERP+ CDVC + F   +HL  H R HTG
Sbjct:  576 CGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTG 735          
The following BLAST results are available for this feature:
BLAST of TCONS_00028281-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2351.818e-7950.00Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 ... [more]
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