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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00028235-protein ID=TCONS_00028235-protein|Name=TCONS_00028235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=826bp
NNDAMIVRNIILIFIFVANVNCSNITNPLGYNETVEKEQFLELFYKIYEL
RLVSNNDTTNSNQSSNHRQRKSLSVDLYEAYKVKSKVEGWITIPEKNEID
KRTRDLIAEKTWDRAGGKIVRKTFEKVGRKAGGFAGASLGASIGATLGLG
NPVFVVAGVFIGQKFGEELGSLAGAISGDYVNNFIAHNIISDSLLQPLTQ
ELTNFVTELSTSDELTCRSDRCAAGYAEANCQCVRCNAQRQYSGNGAAFC
ESCPLGWYPYPSYYPTSCKPCFTGTFGAADGKCYGCRDTGPMRYSDIEGA
TTCKTCPLGSIPPAVYNPKGCGPCGQGFIGKNDGKCHSCNAEGPMRYSDV
QGAITCKTCPLGTIPGYRPWSYTSEKIICKPCGQGWFGKSDGKCYRCKDE
GPMKYSGIETGAPSCKTCPLGHVPDGFHLVCKACATGTFGKMDGKCHKCA
VVGPMAYSDVEGSTYCKTCPLGSIPEYESRCRPCHVGTFGKVDGHCHDCK
EAGPMRYSNVTGAWSCQTCPVGTSPYWTIRPTKCKPCLRGFVGKSNGCKD
CKNDGPMKYSDSIGATICKTCSLGQYPVPNSQPNRCHLCSKGEYGKSDGQ
CYNCKPVGPMKYSDIQGATECKTCPLGRFPIHNPPFYCDYCQLGTYGKSD
GKCYKCTGPMSYTDARGSVSCKTCQVGSQAYRSGPGREYQIGCLRCPWTT
IGTKEGCLRPDQVNTTTVPIATSRGSTRQETTTEESQKPSSTPRPHTIIT
KSTSRATNSPGSSQGTTQPSTHRSTRKNQTIHPHLTTTETIKSSTQPRQP
YTTPPPTTNTPIDQSTTDSNFFGNEG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011641 | Tyr-kin_ephrin_A/B_rcpt-like |
| IPR009030 | Growth_fac_rcpt_ |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 274..321
e-value: 24.0
score: 4.5
coord: 225..268
e-value: 14.0
score: 6.6
coord: 462..499
e-value: 8.5
score: 8.6
coord: 627..674
e-value: 23.0
score: 4.7
coord: 512..551
e-value: 0.87
score: 17.5
coord: 574..624
e-value: 11.0
score: 7.7
coord: 407..449
e-value: 30.0
score: 3.7 |
| None | No IPR available | GENE3D | 2.10.220.10 | | coord: 623..741
e-value: 0.25
score: 10.9 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 421..472
e-value: 0.0096
score: 15.8
coord: 473..526
e-value: 0.0012
score: 18.6
coord: 581..622
e-value: 0.025
score: 14.4
coord: 222..282
e-value: 0.26
score: 11.2
coord: 527..580
e-value: 0.16
score: 11.9 |
| None | No IPR available | GENE3D | 2.10.220.10 | | coord: 292..420
e-value: 0.19
score: 11.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 707..826 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 515..631 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 393..552 |
Blast
The following BLAST results are available for this feature:
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