TCONS_00028187-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028187-protein
Unique Name	TCONS_00028187-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	334

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028187-protein ID=TCONS_00028187-protein|Name=TCONS_00028187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
KKRKYKKKKGFHSMLSQLLLCFSGIFFSYLINGYAIEYLTTTFGKKIFTF
YMVMILTPSFCNAIFGKILILRSKEKHVGSIPKWFYFLCSFFQMASMVSA
NAALAYIPYPTQLVLKSSKPIFILFAGIICLSKGVHHPSRILSTLIIVFG
IMGFMYQQYQVKAESSRHPDVLFFDNLFGLILVFISLLFDALMGYIQDRT
RSKYTLNTNQMIYQINLYSCCLLTAGIIFTNELTGFLKFFMENPSVILYL
LLIGITGAIGQSFIFYTISTFGPLTCSIITNVRKFFQLFLSAILFSHVVT
LSMFAFLLIVFGGLILDVWSQFKFRSKPKVTSLV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015956	XLOC_015956	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028187	TCONS_00028187	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013657	UAA

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013657	UAA transporter	PFAM	PF08449	UAA	coord: 17..318 e-value: 6.0E-48 score: 163.5
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 238..321

Blast

[Close]

BLAST of TCONS_00028187-protein vs. Swiss-Prot (Human)
Match: S35B1 (Solute carrier family 35 member B1 OS=Homo sapiens GN=SLC35B1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.756e-54
Identity = 125/322 (38.82%), Postives = 176/322 (54.66%), Query Frame = 0

Query:   17 QLLLCFSGIFFSYLINGYAIEYLTT-TFGK----KIFTFYMVMILTPSFCNAIFGKILILRSKEKHVGSIPKWFYFLCSFFQMASMVSANAALAYIPYPTQLVLKSSKPIFILFAGIICLSKGVHHP-SRILSTLIIVFGIMGFMYQQYQVKAESSRHPDVLFFDNLFGLILVFISLLFDALMGYIQDRTRSKYTLNTNQMIYQINLYSCCLLTAGIIFTNELTGFLKFFMENPSVILYLLLIGITGAIGQSFIFYTISTFGPLTCSIITNVRKFFQLFLSAILFSHVVTLSMFAFLLIVFGGLILDVWSQFKFRSKPKVTS 332
            +L LCF G+F  Y   G   E +T   +G+    + FTF + ++      NA+F KILI       V     W Y  CS   + +MVS+N+AL ++ YPTQ++ KS KPI ++  G+  L K   +P ++ L  L+IV G+  FMY+  +V                +G +L+ +SL  D L G  QD  R+ Y   +N M+  INL+S  LL  GI+FT EL  FL F    P++I  +LL G+T A+GQSFIF T+  FGPLTCSIIT  RKFF +  S ILF++ ++   +   ++VF GL LD     KF    K TS
Sbjct:   13 RLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKK--KYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVG-------YGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLDA----KFGKGAKKTS 321

The following BLAST results are available for this feature:

BLAST of TCONS_00028187-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S35B1	4.756e-54	38.82	Solute carrier family 35 member B1 OS=Homo sapiens...	[more]

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TCONS_00028187-protein (polypeptide) - C. hemisphaerica