TCONS_00028158-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028158-protein
Unique NameTCONS_00028158-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028158-protein ID=TCONS_00028158-protein|Name=TCONS_00028158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MFIKSKQFLSLNIFLIMHISFIKCYQQRHDSFFQLNTNTEITNTNYQSTL
SISYLQCSFVCQHQDCTAASYNSKDGVCKTFQLPLKHILTSPKEETDSFI
FQPCVETPSKCLHGGECIRNVTSSTGYHCICVEPWRGDNCEKPPPCPWPD
FIFKREMCYYKNSINQETFWSAQAECVKRGGRLATAATNDGWQSIREIVI
EENQWFTIGLTRTDSSGWQWLSGAPNNTIPWKAPFEPSGDGDCASVFPDT
SGLNDFHCDIIRRYICERDVNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015940XLOC_015940Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028158TCONS_00028158Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR013032EGF-like_CS
IPR003609Pan_app
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 103..141
e-value: 7.7E-5
score: 32.1
IPR000742EGF-like domainPFAMPF00008EGFcoord: 104..139
e-value: 1.2E-7
score: 31.8
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 100..141
score: 14.689
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 146..267
e-value: 2.1E-9
score: 47.2
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 166..268
e-value: 5.1E-13
score: 49.6
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 154..267
score: 13.197
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 136..271
e-value: 8.5E-21
score: 73.8
NoneNo IPR availableGENE3D2.10.25.10coord: 101..135
e-value: 2.5E-7
score: 30.4
NoneNo IPR availableCDDcd00054EGF_CAcoord: 106..141
e-value: 0.00886427
score: 32.2234
NoneNo IPR availableCDDcd00037CLECTcoord: 160..268
e-value: 9.12115E-13
score: 61.4817
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 102..143
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 243..266
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 129..140
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 129..140
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 24..104
score: 7.378
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 141..270

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028158-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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