TCONS_00027929-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027929-protein
Unique NameTCONS_00027929-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length797

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027929-protein ID=TCONS_00027929-protein|Name=TCONS_00027929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=797bp
MTERTSSKKKNKNSGGMFNYLLHAVDKVFYHVYDGEPVRRKRTGSTNSIL
EEEVIFCKNNVCVKVKNERDDSQMDEIAGYMNMKKIYRSDCEFSDLILSW
VPNKLLSAGSVEEAEIMLPPAPTEQINPLKEPSKYSSEVIKDPDSVDGEL
DAKTDFPEVAKDFDSPLGNVFGINLIDMKTVKLFYSSLPGSDAGQFVIGS
HDNEYKVFYFHNGGLHKIADIFDTWNGCEADPDLIPEEDGQKVYYITGEH
NVGLDSSSKSPNEEGRYKALNMHNWMTFMNPLGQIEDSYNFRKHVFFGGL
SHEVRPDAWKFLLYYHPLHSTRKERDAMKDEKTKVYEAIHNKRLSLSGED
YEIFWKNVQFTVDKDVVRTDRSHPYYAGQDNPNIQKMRNILLNYAVYNPA
MGYSQGMSDLVAPVLATLHDEVDCFWCFVGLMESSMFATTPRDDSMDKSL
GFFRELLRLIKPEFYLHCLCTDPDMELLFAHRWLVLCFKREFIFHEVLNI
WEACWSRYQTDYFHIFICVAMCTIYGAGCMEKKMDSVEMLQYFTEMATKF
DGSTVLKEARSILHKFRQFNKIPCTLKGLMSTKGVWDGGILPEIECISHH
RRCCKELASPRKVADDSTANDVTGEIESEESGKLKVEIDEMREDVDGIDL
EHAVPDGNVVSAKDDGASEREDIEAKTETEILEKTDNINDLPKRCNDEDK
TITSLEGAPNTIDSELTVSCDVNNIPGDDTEACKLVQRSQKYLDTDCQQE
KPVNEDTADTDSDNVEQNVSRVEDLDDKQSANTNDXRGTKCFSCEES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015792XLOC_015792Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027929TCONS_00027929Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 296..538
e-value: 1.6E-34
score: 130.7
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 303..523
e-value: 2.1E-40
score: 138.6
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 299..508
score: 33.395
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 447..566
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 272..467
NoneNo IPR availableGENE3D1.10.8.270coord: 317..433
e-value: 1.4E-28
score: 98.8

Blast
[Close]
BLAST of TCONS_00027929-protein vs. Swiss-Prot (Human)
Match: TBC16 (TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 6.727e-141
Identity = 216/468 (46.15%), Postives = 309/468 (66.03%), Query Frame = 0 
Query:  140 IKDPDSVDGELDAKTDFPEVAKDFDSPLGNVFGINLIDMKTVKLFYSSLPGSDAGQFVIGSHDNEYKVFYFHNGGLHKIADIFDTWNGCE----ADPDLIPEEDGQKVYYITGEHNVGLDSSSKSPNEEGRYKALNMHNWMTFMNPLGQIEDSYNFRKHVFFGGLSHEVRPDAWKFLLYYHPLHSTRKERDAMKDEKTKVYEAIHNKRLSLSGEDYEIFWKNVQFTVDKDVVRTDRSHPYYAGQDNPNIQKMRNILLNYAVYNPAMGYSQGMSDLVAPVLATLHDEVDCFWCFVGLMESSMFATTPRDDSMDKSLGFFRELLRLIKPEFYLHCLCTDPD-MELLFAHRWLVLCFKREFIFHEVLNIWEACWSRYQTDYFHIFICVAMCTIYGAGCMEKKMDSVEMLQYFTEMATKFDGSTVLKEARSILHKFRQFNKIPCTLKGL--MSTKGVWDGGILPEIECISHH 600
            ++ PDS       + D P+     +   G VF ++L  M++++LF+S      +GQ V+ S +++YKVF+FH+GGL K++D+F  W  C      D  + P++   +           L SS   P EE  YK L +  W+  +N LGQ+E+ Y  RK +FFGG+   +R + W FLL Y+   ST +ER+A++ +K K Y  I  KRLS++ E++  FW+NVQFTVDKDVVRTDR++ ++ G+DNPN++ MR ILLNYAVYNPA+GYSQGMSDLVAP+LA + DE D FWCFVGLM++++F ++PRD+ M+K L + RELLRL    FY H +    D +++LF HRWL+LCFKREF   E L IWEACW+ YQTDYFH+FICVA+  IYG   +E+++ + +ML +F  +A   +G  VL++ARS+L++FR   +IPC+L  L  +   G+WD G +P +EC  HH
Sbjct:  269 LRFPDSNGLLQTPRWDEPQRVCALEQICG-VFRVDLGHMRSLRLFFSD-EACTSGQLVVASRESQYKVFHFHHGGLDKLSDVFQQWKYCTEMQLKDQQVAPDKTCMQFSI----RRPKLPSSETHP-EESMYKRLGVSAWLNHLNELGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYSEIQQKRLSMTPEEHRAFWRNVQFTVDKDVVRTDRNNQFFRGEDNPNVESMRRILLNYAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPRDEDMEKQLLYLRELLRLTHVRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWAHYQTDYFHLFICVAIVAIYGDDVIEQQLATDQMLLHFGNLAMHMNGELVLRKARSLLYQFRLLPRIPCSLHDLCKLCGSGMWDSGSMPAVECTGHH 729
The following BLAST results are available for this feature:
BLAST of TCONS_00027929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC166.727e-14146.15TBC1 domain family member 16 OS=Homo sapiens GN=TB... [more]
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