TCONS_00027840-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00027840-protein
Unique Name	TCONS_00027840-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	406

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00027840-protein ID=TCONS_00027840-protein|Name=TCONS_00027840-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MATTVXDIPSKITSRNFTSLGHCDYSKSWAFLRKVSYKSLHIYGSGMKRL
EDLITEEVDKMCSTLSRDLGKPILIDSYIGNSLINTICHMCFSKTYDFDD
PEFAHIMGFFKMINDGSLPGQAISIFPWLQYFPDTERFKNLKLGSKQRHD
YANKMFNEHIATFNPHNIRDLTDNLLHFSQNKEMWKDAGFEKVTQEQLES
VVSSIMFAGVETQSATFRWLLLFMLHHPEYQTKIYEEIKSNVGLKRRISP
EDKEVATITSCVILETHRMASVGPLSLPHKTTVDTSVGGHTIPKNTTIFT
NLYSMHYDPTHWDEPEKFKPERWLNADGSLKKEKATHYLPFSAGTRVCLA
EKMAQLQLFMITTNFFRNFEVSLAPGEQLPSLKDGVMGITLNPPRRKIIL
TRRKHN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015730	XLOC_015730	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00027840	TCONS_00027840	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002401	Cyt_P450_E_grp-I
IPR001128	Cyt_P450
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 260..278 score: 35.99 coord: 197..214 score: 32.32 coord: 301..325 score: 38.18 coord: 338..348 score: 55.79 coord: 348..371 score: 27.43 coord: 82..100 score: 28.56 coord: 217..243 score: 34.91
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 208..225 score: 34.2 coord: 348..359 score: 32.17 coord: 339..348 score: 58.6 coord: 261..272 score: 34.56
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 26..398 e-value: 4.0E-85 score: 286.2
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 19..403
None	No IPR available	GENE3D	1.10.630.10		coord: 11..406 e-value: 7.3E-94 score: 314.5
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 341..350

Blast

[Close]

BLAST of TCONS_00027840-protein vs. Swiss-Prot (Human)
Match: CP17A (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.358e-67
Identity = 114/375 (30.40%), Postives = 194/375 (51.73%), Query Frame = 0

Query:   12 ITSRNFTSLGHCDYSKSWAFLRKVSYKSLHIYGSGMKRLEDLITEEVDKMCSTLSRDLGKPILIDSYIGNSLINTICHMCFSKTYDFDDPEFAHIMGFFKMINDGSLPGQAISIFPWLQYFPDTERFKNLKLGSKQRHDYANKMFNEHIATFNPHNIRDLTDNLLHF---SQNKEMWKDAGFEKVTQEQLESVVSSIMFAGVETQSATFRWLLLFMLHHPEYQTKIYEEIKSNVGLKRRISPEDKEVATITSCVILETHRMASVGPLSLPHKTTVDTSVGGHTIPKNTTIFTNLYSMHYDPTHWDEPEKFKPERWLNADGSLKKEKATHYLPFSAGTRVCLAEKMAQLQLFMITTNFFRNFEVSLAPGEQLPSLK 383
            I S N   +   D    W   R+++  +  ++  G ++LE +I +E+  +C  L+   G+ I I   +  ++ N I  +CF+ +Y   DPE   I  + + I D       + + PWL+ FP+ +  + LK   K R+D  NK+   +   F   +I ++ D L+     S N     D   E ++   + + +  I  AGVET ++  +W L F+LH+P+ + K+YEEI  NVG  R  +  D+    +    I E  R+  V P+ +PHK  VD+S+G   + K T +  NL+++H++   W +P++F PER+LN  G+     +  YLPF AG R C+ E +A+ +LF+I     + F++ +    QLPSL+
Sbjct:  104 IASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 477

The following BLAST results are available for this feature:

BLAST of TCONS_00027840-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00027840-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP17A	2.358e-67	30.40	Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s...	[more]

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TCONS_00027840-protein (polypeptide) - C. hemisphaerica