TCONS_00027811-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027811-protein
Unique NameTCONS_00027811-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length525

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027811-protein ID=TCONS_00027811-protein|Name=TCONS_00027811-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp
XAIATIKYVGQLPWKQHTGVYLGVEFEKPIGENDGCDLFETKEEHGKFIT
VDKIDKFIIKNEKAHYTTTEDALNQKPTDEKKIYKRLSFPIVSTLIKMKP
KIKSASSLNDLTKREDHQRGTNGNDEIDAHRKRSSTECSPNTAPIKHDDD
DVPIYAVSEICVNQEPPHESNESDEKEKKANKRMSFPVSLSNLVPSFPAM
PKMRLRSKSLENVHKLNVENPYYAAALNIRKQSLEGIDEGDEVIVLCFNQ
GCDVKLEKDLLQKHQQQCPYALEKCPNNGCDLEMRRIDINKHDIMECEHA
IVNCKQPGCQVILSRKLMTKHSKECAKEVPKDSTPQDAYEKMSAGTDEVI
YASSGPSFSCPAPRCLYHSEGKQIMAHICSQHSELLLKHLNEIKLIFAKE
EKDFSHLYTKPIKKVAPIPRPRKPSNNDEAPLYSTPCREVSNSEAEKNYG
GNPLYTTPDEKLTSRKVEDTEYLTPVDGCKMTNNHVYLTPVDDGKNNKNS
NDKKSSSQGEYEYVAWDLKSMSIPA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015710XLOC_015710Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027811TCONS_00027811Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainGENE3D2.30.30.190coord: 1..57
e-value: 8.9E-8
score: 31.2
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 4..54
e-value: 1.7E-7
score: 31.1
IPR000938CAP Gly-rich domainSUPERFAMILY74924Cap-Gly domaincoord: 4..56
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 244..292
e-value: 1.1E-4
score: 22.8
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 264..309
score: 9.986
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 295..378
e-value: 0.0013
score: 18.4
coord: 240..292
e-value: 1.5E-9
score: 37.4
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 242..292

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027811-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top