TCONS_00027809-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00027809-protein
Unique Name	TCONS_00027809-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	593

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00027809-protein ID=TCONS_00027809-protein|Name=TCONS_00027809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=593bp
MIFPAKLIVICCLFLIKPSTGEGDDAKATTQSPPLTTPFTNSSTTSNSTV
NATTTTVTTTTTTPKPEESAEEKEKHGSMTIFFVLSVLGLCIITIHFLIK
TKFSYLPESVAIVFVGAMLGGLIQLLKKYNLADWEKEELFDPTIFFLILL
PPIIFESGYNLHKGNFFANIGSIIVFAVFGTLISAVIVGGVIYILGKGNI
IHPLTSKESFVFGSLISAVDPVATLAIFHALNVDPLLNMLVFGESILNDA
VAIVLTRAVLNSTTFMSSVVAFVKIFFGSSLIGVVSAALSALITKYVDLR
QHPSLELGMMFIFAYAPYGLAEGLQLSGIMAILFCGIVMSHYTHFNLSPV
SQITVQHLFRTAAFVGETCVFAYLGMSIFSYDHKFEAAFIIWSIVLILVG
RAVNIFPLTFVLNYFRETKISRRNQLIMWFSGLRGAIAFALAINLDSLEE
DKRRLLVTTTLVIVLFTLLVLGGSTLPLLKCMDRRERNNENEGQLSLSKT
AAEGSAVEAEQLTDDEWRLTKRIAMKGFTKIDAKYLVPFLTRKVTRQELR
NAQHEMQKLTSQWYSEVRDSPDTSDIEVEFQQPTRKIASTDNL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015709	XLOC_015709	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00027809	TCONS_00027809	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004709	NaH_exchanger
IPR006153	Cation/H_exchanger

Vocabulary: **Biological Process**
Term	Definition
GO:0006885	regulation of pH
GO:0006814	sodium ion transport
GO:0055085	transmembrane transport
GO:0006812	cation transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015385	sodium:proton antiporter activity
GO:0015299	solute:proton antiporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015385	sodium:proton antiporter activity
molecular_function	GO:0015299	solute:proton antiporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 542..562
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..73
IPR004709	Na+/H+ exchanger	PRINTS	PR01084	NAHEXCHNGR	coord: 173..181 score: 58.94 coord: 213..223 score: 78.52 coord: 158..172 score: 55.97 coord: 144..155 score: 71.94
IPR004709	Na+/H+ exchanger	TIGRFAM	TIGR00840	TIGR00840	coord: 76..543 e-value: 1.2E-113 score: 378.4
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 89..480 e-value: 7.2E-67 score: 225.7

Blast

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BLAST of TCONS_00027809-protein vs. Swiss-Prot (Human)
Match: SL9A8 (Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4)

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 297/526 (56.46%), Postives = 403/526 (76.62%), Query Frame = 0

Query:   68 ESAEEKEKHGSMTIFFVLSVLGLCIITIHFLIKTKFSYLPESVAIVFVGAMLGGLIQLLKKYNLADWEKEELFDPTIFFLILLPPIIFESGYNLHKGNFFANIGSIIVFAVFGTLISAVIVGGVIYILGKGNIIHPLTSKESFVFGSLISAVDPVATLAIFHALNVDPLLNMLVFGESILNDAVAIVLTRAVLNST-----------TFMSSVVAFVKIFFGSSLIGVVSAALSALITKYVDLRQHPSLELGMMFIFAYAPYGLAEGLQLSGIMAILFCGIVMSHYTHFNLSPVSQITVQHLFRTAAFVGETCVFAYLGMSIFSYDHKFEAAFIIWSIVLILVGRAVNIFPLTFVLNYFRETKISRRNQLIMWFSGLRGAIAFALAINLDSLEEDKRRLLVTTTLVIVLFTLLVLGGSTLPLLKCMDRRE--RNNENEGQLSLSKTAAEGSAVEAE---QLTDDEW--RLTKRIAMKGFTKIDAKYLVPFLTRKVTRQELRNAQHEMQKLTSQWYSEVRDSPDTSD 575
            E A+++E+   MTIFF L VL +CII +H LI+ +  +LPESVA+V +G ++G +I++++   LA+W++EE+F P +FFL+LLPPIIFESGY+LHKGNFF NIGSI +FAVFGT ISA +VGG IY LG+ ++I  L   +SF FGSLISAVDPVAT+AIF+AL+VDP+LNMLVFGESILNDAV+IVLT      T           TF+ ++  F+K+FFGS+ +G ++  +SAL+ K++DLR+ PSLE GMM IFAY PYGLAEG+ LSGIMAILF GIVMSHYTH NLSPV+QI +Q   RT AF+ ETCVFA+LG+SIFS+ HKFE +F+IW IVL+L GRAVNIFPL+++LN+FR+ KI+ +   IMWFSGLRGAI +AL+++LD    +KR+L+ TTT+VIVLFT+L+LGGST+PL++ MD  +   +  N+  ++LSKT   G+ VE+E   +LT++E+     +R  +KGF  +DAKYL PF TR++T+++L + + +M+ LT++WY EVR  P  S+
Sbjct:   49 EQAQQEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRKNMSDVSGWQTFLQALDYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEISFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLDLEPMEKRQLIGTTTIVIVLFTILLLGGSTMPLIRLMDIEDAKAHRRNKKDVNLSKTEKMGNTVESEHLSELTEEEYEAHYIRRQDLKGFVWLDAKYLNPFFTRRLTQEDLHHGRIQMKTLTNKWYEEVRQGPSGSE 574

The following BLAST results are available for this feature:

BLAST of TCONS_00027809-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00027809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SL9A8	0.000e+0	56.46	Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC...	[more]

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TCONS_00027809-protein (polypeptide) - C. hemisphaerica