TCONS_00027673-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027673-protein
Unique NameTCONS_00027673-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length674

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027673-protein ID=TCONS_00027673-protein|Name=TCONS_00027673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=674bp
MNVALHVTDMATGDTSALKENPETKDKCNANFLVNSETNSVKGKLKPKLD
FCSNTLKAPKYILDIIKYGYFLPFVDIPERSISNNNKSALENKEFVSESI
RDLLQDGSAREVEFAPKVISPLSVASNSVGKKRLILDLRYVNAHLFKERI
SFDDWGSLKNLISENGFAYKFDLRKGYYHVEIAEAHQTYLGFSWNLDGRE
KFFIFCVLPFGLSSAPMIFTKLLRPLVSYWHDHGIKICVFLDDGGGTESN
LVKAISSSNFVRRSLKSSGFVVNEEKSVWHPQKRLTWLGVIIDFSENAYF
ITEKRIEALIDLIIETLTLKRVTSRILSKVAGSIISMKFVLGDITQLKSR
YLYEAIDSEVAWDAPISLKKFPQAIRELEFWLGNLRRLNHRFISEHRATF
VNVYSDASDFGIGSHIPALGAESHRNLDPKEQGLSSTWRELSAILYSLRS
FKQLLTRQSINWFTDNFAASLIVSKGSRKKHLQDLALDIFNFCAASLITL
KINWIPREENETADEISKYIDFDDWQITDEFFTFLNKRWGPFSVDRFARP
ENTKLPRFNSKFFVPGSEAVDAFSENWSNEINYVVPPVDLIPEALKFILH
SQCKGTLVIPLWKSAPFWSMIRDEFYSRMLVESIIITKGREILEKPTNEL
IMLSPDKYRGSMIAFKFDSKNIIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015617XLOC_015617Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027673TCONS_00027673Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR000477RT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 82..209
e-value: 1.1E-12
score: 47.5
NoneNo IPR availableGENE3D3.30.70.270coord: 210..296
e-value: 6.0E-10
score: 38.5
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 171..292
e-value: 3.0586E-26
score: 103.578
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 88..489
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 399..519
e-value: 0.0018
score: 17.4
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 166..292
e-value: 6.8E-13
score: 48.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 84..292
score: 11.09

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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