TCONS_00027508-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027508-protein
Unique NameTCONS_00027508-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027508-protein ID=TCONS_00027508-protein|Name=TCONS_00027508-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
KKIKRQYHKMMNNALQTYNGELSLITRPMPKVTSPNDVLIKVTHAGVCGT
DLSIIAGRFEAAKKIIQGHEFSGVVSGVGAKVKHLKIGDRICVNPYNYCG
SCAFCVRGQPQFCVKEAMKTALGYQKDGGFQEYIVLPGHLCFPLPPTMQL
RQSVFCQPLSTILRGWDNMGKIALDSKVLIAGAGMTDKISFLDGRFCLGL
SY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015506XLOC_015506Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027508TCONS_00027508Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013154ADH_N
IPR002328ADH_Zn_CS
IPR011032GroES-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 35..143
e-value: 1.5E-30
score: 105.1
NoneNo IPR availableGENE3D3.90.180.10coord: 11..187
e-value: 7.7E-45
score: 152.4
IPR002328Alcohol dehydrogenase, zinc-type, conserved sitePROSITEPS00059ADH_ZINCcoord: 68..82
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 14..184

Blast
[Close]
BLAST of TCONS_00027508-protein vs. Swiss-Prot (Human)
Match: DHSO (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 3.779e-18
Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 0 
Query:   20 GELSLITRPMPKVTSPNDVLIKVTHAGVCGTDLSIIA----GRFEAAKKIIQGHEFSGVVSGVGAKVKHLKIGDRICVNPYNYCGSCAFCVRGQPQFCVKEAMKTALGYQKDGGFQEYIVLPGHLCFPLPPTMQLRQSVFCQPLSTILRGWDNMGKIALDSKVLIAGAGMTDKISFL 192
            G+L L   P+P+   PN+VL+++   G+CG+D+        G F   K ++ GHE SG V  VG+ VKHLK GDR+ + P     +  FC  G  ++ +  ++        DG    +       C+ LP  +   +    +PLS  +      G + L  KVL+ GAG    ++ L
Sbjct:   18 GDLRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMG--RYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLL 190
The following BLAST results are available for this feature:
BLAST of TCONS_00027508-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHSO3.779e-1829.94Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
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