TCONS_00027232-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027232-protein
Unique NameTCONS_00027232-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027232-protein ID=TCONS_00027232-protein|Name=TCONS_00027232-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MVQTVAGSFKQQVLDAHNSCRQKHGTPPLQWSDVLAQQAQSWADKIAKKG
KFEHSPSKLRKGQGENIACAGGKELTGEDAVKMWYDEIKDFNFKNVKYNS
KCGHFSQMVWVSTTEIGAGKGTAKNGMQFVVCRYNPAGNMLSEFKNNVKP
PGAPASTAPPPKQQAAAAPPKTQPQPKPIKSQPIQKSKPKTQIVEKPKPV
KVVKKKADQKPKTKLKNVEQPIIPTRTQVVHAAPPQMNRKTMVLKSEKNF
YKKTTTTITNNNNIEPTITTNQPIKVKQNQRAPPKSNVKVTEKHIRYDST
LKQTSGNKLIYVMDYITEVKEVKPKCSTVQVKNIGKEAKVAMWKTKEYLK
IGHSYTIMHHCLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015313XLOC_015313Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027232TCONS_00027232Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 29..47
score: 35.18
coord: 80..93
score: 41.13
coord: 129..142
score: 46.69
coord: 102..118
score: 46.38
IPR014044CAP domainSMARTSM00198SCP_3coord: 8..142
e-value: 1.7E-44
score: 163.8
IPR014044CAP domainPFAMPF00188CAPcoord: 14..134
e-value: 5.9E-25
score: 88.4
IPR014044CAP domainGENE3D3.40.33.10coord: 1..153
e-value: 1.9E-48
score: 164.0
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 7..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..215
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 103..113
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 129..140
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 8..140
e-value: 7.80997E-66
score: 205.907

Blast
[Close]
BLAST of TCONS_00027232-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 4.600e-36
Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0 
Query:    1 MVQTVAGSFKQQVLDAHNSCRQKHGTPPLQWSDVLAQQAQSWADKIAKKGKFEHSPSKLRKGQGENIACAGGKELTGEDAVKMWYDEIKDFNFKNVKYNSKCGHFSQMVWVSTTEIGAGKGTAKNGMQFVVCRYNPAGNMLSE--FKNNVKPP 151
            M ++ +  F  +VL AHN  RQKHG PPL+    L ++AQ +++ +A     +HSP   R   GEN+A A   + TG++    WY EIK++NF+   + S  GHF+ MVW +T ++G GK +A +G  FVV RY PAGN+++E  F+ NV PP
Sbjct:    1 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152
The following BLAST results are available for this feature:
BLAST of TCONS_00027232-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR14.600e-3642.48Golgi-associated plant pathogenesis-related protei... [more]
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