TCONS_00027154-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027154-protein
Unique NameTCONS_00027154-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length585

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027154-protein ID=TCONS_00027154-protein|Name=TCONS_00027154-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MSPMEAQSFYLIRSISQRCRCGVLMTDCSNCLDEYNREKEWEVKRCIGCN
DVIPDWDIARHRKLNDKCMNGECSNTINYECPTEDQVRIEIVAYQQDREK
LYPAKVLCFNIPCSAETLISDIKKRIEYSLGIPTEHQLIVEPHKNVYEIL
EPLESASYFSYQQEERTVCFPETSHLAQKDIKVIHLHLAVLQDEFTSTKT
KQIYEVMGIEQYQQLEIKAFGSRKTLLPPRYYRSGDLIRAQIQQVFGIPA
RNQVLVDSEGKRRFENNEYIQKDVFDADDVEEVNETHQDQADIIQGGILY
LTVVCYGGKFTNEKQFDEICEEHHIKPIKDFNTFKLQFLTKEEVLTSELF
KYVSHVRKYVRQKYNIRNSDQVIYFKGEKLSDHRKTFDLFLKYNSPGQMT
LNLVINKHPFNICIKPKVNVQALANRYGSSSFVMEVTDSDDVKIVKDRVA
AAAFNREEDENYCFIDLWSSKDNRQLEDGHTLAEYNLLDGDKILMKQRVV
IQLTFVNTEEITVFYEIIESDLACKNVKKLIKEILKTHKLKKSQILEMKD
MNNDVVLSLSSDQKLYEFRRLHLRIDKSRSDCNVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015264XLOC_015264Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027154TCONS_00027154Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 333..405
e-value: 0.0015
score: 18.1
NoneNo IPR availableGENE3D3.10.20.90coord: 417..505
e-value: 5.3E-5
score: 22.6
NoneNo IPR availableGENE3D3.10.20.90coord: 104..199
e-value: 0.034
score: 13.6
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 416..495
score: 9.831
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 426..498

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027154-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top