TCONS_00027133-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027133-protein
Unique NameTCONS_00027133-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length486

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027133-protein ID=TCONS_00027133-protein|Name=TCONS_00027133-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MYNICCFVPWLALVIQLTMQPIHGIPMGNMKEHVGGGLENVQFYNEMLPD
EIKSHLNGDVYEEEKEEDSLNNFNDDTNLDIQHAPLKKLENKRWPNGVVP
YVIMSKEYTNEEKRLIRAGLRDIEAVAPCIRFVEYSDGDPNCPNTHVQVF
KGLGCWSLIGRTASGKAQKLALDYYCITEDKGVIMHEFLHVLGFYHEQAR
PDRDEYIRIFWDRLSDGAEPQFRKTERTDDLGVAYDPVSIMHYPNTAYAK
EYGAITMEWKANPKQVLGGDKLSSKDILQLNRLYCDGGKVVTTTKKPNPT
TTTQTPVTTTTTTKKPTTTTIPITTTTTSTTPTTTTKTLTTTTTTTTTTT
QKPTTTKKPKTTKQSTTTTITTETPTTTKKTTPITTKPTKKVCGDYYGLS
CMNARPGRCSQWMKNRCPRSCNVCTGPLSETCMNLHNNWSNEYCQTMADK
GRCQSSNYWTRYQMKTQCTKTCCQRNELYTFRGQRG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015250XLOC_015250Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027133TCONS_00027133Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR003582ShKT_dom
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 197..214
score: 44.26
coord: 234..249
score: 43.02
coord: 272..285
score: 43.45
coord: 178..196
score: 45.09
IPR001506Peptidase M12APFAMPF01400Astacincoord: 92..286
e-value: 4.3E-45
score: 153.6
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 90..239
e-value: 3.5E-30
score: 116.3
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 431..474
e-value: 8.5
score: 10.9
coord: 392..425
e-value: 0.51
score: 19.4
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 86..285
e-value: 2.1E-43
score: 148.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..383
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 90..286
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 96..284
e-value: 9.54623E-61
score: 197.794

Blast
[Close]
BLAST of TCONS_00027133-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.015e-29
Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 0 
Query:   51 EIKSHLNGDVYEEEKEEDSLNNFNDDTNLD---IQHAPLKKLENKRWPNGVVPYVIMSKEYTNEEKRLIRAGLRDIEAVAPCIRFVEYSDGDPNCPNTHVQVFKGLGCWSLIGRTASGKAQKLALDYYCITEDKGVIMHEFLHVLGFYHEQARPDRDEYIRIFWDRLSDGAEPQFR--KTERTDDLGVAYDPVSIMHYPNTAYAKEYGAITMEWKANPKQVLGGD-KLSSKDILQLNRLY 284
            ++   ++ D+++   E   L+ F  D  LD   I+++ +   E  RWP+  +PYV+      N +  ++ A  R    +  CI F  ++ G+ N    ++ VFKG GCWS +G    GK Q+L++   C  +    + HEFLH LGF+HEQ+R DRD+Y+RI WDR+  G E  F     + +D L V YD  S+MHY  TA+        +   ++ + V+G     S  D+L+LN+LY
Sbjct:   28 DVDGGMDQDIFDI-NEGLGLDLFEGDIRLDRAQIRNSIIG--EKYRWPH-TIPYVLEDSLEMNAKGVILNAFER--YRLKTCIDFKPWA-GETN----YISVFKGSGCWSSVGNRRVGK-QELSIGANC--DRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLY 253
The following BLAST results are available for this feature:
BLAST of TCONS_00027133-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.015e-2933.75Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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