TCONS_00026776-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026776-protein
Unique NameTCONS_00026776-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026776-protein ID=TCONS_00026776-protein|Name=TCONS_00026776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MRFSRFLSIAFVVFTLSSKTLAHYVCGVNNGREGPSENSTPNIPQARIIG
GENAQLGSWPWMVSLRPVGQPGNHVCGGVLIHPKWVLTAAHCMLRAPIES
VVLGENDFSVKEGKEQQIRVIRSITHPKYDEPSSNNDIMLLKLKHPARIT
KNVRPICLPPRKFKKNRFDGDECVITGWGVNGIIPQGFTNPTILQEAKVK
VLTKKTCKKAWFFREITRNMVCAVGETTRACFGDSGGPLKCKSKGHWYLW
GLTSFGPNDCQGRPPVFTFVPQYLRWIRRVVTW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015043XLOC_015043Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026776TCONS_00026776Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 77..92
score: 64.03
coord: 133..147
score: 43.42
coord: 228..240
score: 59.5
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 47..277
e-value: 1.3E-80
score: 283.8
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 48..277
e-value: 7.6E-61
score: 205.6
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 48..282
score: 33.174
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 48..280
e-value: 2.93916E-87
score: 261.827
NoneNo IPR availableGENE3D2.40.10.10coord: 59..80
e-value: 1.0E-21
score: 76.3
NoneNo IPR availableGENE3D2.40.10.10coord: 47..58
e-value: 4.9E-7
score: 28.8
NoneNo IPR availableGENE3D2.40.10.10coord: 156..282
e-value: 7.4E-37
score: 126.1
NoneNo IPR availableGENE3D2.40.10.10coord: 81..155
e-value: 8.4E-32
score: 109.0
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 87..92
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..281

Blast
[Close]
BLAST of TCONS_00026776-protein vs. Swiss-Prot (Human)
Match: CTRL (Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.390e-56
Identity = 100/239 (41.84%), Postives = 137/239 (57.32%), Query Frame = 0 
Query:   47 RIIGGENAQLGSWPWMVSLRPVGQPGNHVCGGVLIHPKWVLTAAHCMLRAPIESVVLGENDFSVKEGKEQQIRVIRSITHPKYDEPSSNNDIMLLKLKHPARITKNVRPICLPPRKFKKNRFDGDECVITGWG-VNGIIPQGFTNPTILQEAKVKVLTKKTCKKAWFFREITRNMVCAVGETTRACFGDSGGPLKCKSKGHWYLWGLTSFGPNDCQGR-PPVFTFVPQYLRWIRRVVTW 283
            RI+ GENA LGSWPW VSL+     G H CGG LI   WV+TAAHC +      VVLGE D S      Q + V R+ITHP ++  + NND+ LLKL  PA+ T  + P+CL      +   +G  CV TGWG ++G+   G   P  LQ+  + ++T   C++ W    IT +M+CA G    +C GDSGGPL C+    W L G+ S+G  +C  R P V+T V ++  WI +V+ +
Sbjct:   33 RIVNGENAVLGSWPWQVSLQD--SSGFHFCGGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPVCLASS--NEALTEGLTCVTTGWGRLSGV---GNVTPAHLQQVALPLVTVNQCRQYW-GSSITDSMICAGGAGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCNVRAPAVYTRVSKFSTWINQVIAY 263
The following BLAST results are available for this feature:
BLAST of TCONS_00026776-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRL7.390e-5641.84Chymotrypsin-like protease CTRL-1 OS=Homo sapiens ... [more]
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