TCONS_00026089-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026089-protein
Unique NameTCONS_00026089-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length888

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026089-protein ID=TCONS_00026089-protein|Name=TCONS_00026089-protein|organism=Clytia hemisphaerica|type=polypeptide|length=888bp
MSADDPPYSVEYAKSGRASCKGCKNTISQATLRIARMVQSPHFDGKVPNW
FHFHCFFAKFKAKEEGDFGKFDSIRWDDQERLREKLNNSGGVTGAASGGK
SKKKTKNGSVDVVDGPSSRETMEFSIEYAKSSRAKCRKCEEKIEKGVIRI
SKLMEPEEKKFAAQVPHWHHVECFLLRREELEAETFGAADIPGFSSLSAE
DQKEVSAKVARPKTNTKKLKQEEKPSKEEQKKANAEKDAQKKQNDRYWKV
RDGLYQACTNSDLKTMLSANGYDTTGGEDSLLDRCADGVLFGALELCPEC
KNGRLVLSTTKNGYKCTGNVSGWTACTYLTQKPARKMWLIPTDLRKESDF
LTKIKLKVRERIFPNKLQKDEVKEEKEVEGKPLQNKIMVLVGRLKQTQSE
LKEKVENLGGSITSTPTPDCFCCISNPGEVAKGSVKMGTVEKYNIPVVTE
EYLDALDKTGGAKKILTQYAIAPWGGNREQVNTSSKSQGTKRKNTAAENA
SGGGASKKSKLTVKGGAVVDTDTDLEDTHHILNTNKVVYAAVLGLVDLSR
GSNSYYKLQILEPDDTKKTRFYYLFRAWGRVGTSIGGNKLEKFLNKENAI
EHFEDLYYEKTGNEWGNRTNFVKQPNKFYPLDIDYGQEDEEVQSRIAPGS
KSTLSKPTQELMKMIFDIEEMKHALLEFEIDLKKMPLGKLSKKQIETAYT
CLTECQRYLQDEVTGSKILDASNRFFTLIPHDFGLKTPPLLDNEDIINSK
VKMLDSLLEIEIAYSLLKGGSADQEQDPLDVHYTSLKADIKEVDKESDEY
KMICEYVQNTHAKTHSHYKLKVQEVFAVDRKGEKKRYRAFRDLPNRQLLW
HGSRRTNFAGIISQGLRIAPPEAPVTGYMFGKGVYFAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014671XLOC_014671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026089TCONS_00026089Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR008893WGR_domain
IPR012982PADR1
IPR001510Znf_PARP
IPR004102Poly(ADP-ribose)pol_reg_dom
IPR012317Poly(ADP-ribose)pol_cat_dom
IPR003034SAP_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0003950NAD+ ADP-ribosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006471protein ADP-ribosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006471 protein ADP-ribosylation
molecular_function GO:0003677 DNA binding
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 380..460
e-value: 5.8E-9
score: 45.8
IPR001357BRCT domainGENE3D3.40.50.10190coord: 380..499
e-value: 1.1E-9
score: 37.9
IPR001357BRCT domainPFAMPF00533BRCTcoord: 380..455
e-value: 2.1E-8
score: 34.4
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 378..453
score: 8.805
IPR001357BRCT domainCDDcd00027BRCTcoord: 385..456
e-value: 5.06173E-7
score: 47.3163
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 378..458
IPR008893WGR domainSMARTSM00773WGR_clscoord: 539..622
e-value: 9.7E-28
score: 108.2
IPR008893WGR domainPFAMPF05406WGRcoord: 539..621
e-value: 1.5E-20
score: 72.9
IPR008893WGR domainGENE3D2.20.140.10coord: 544..624
e-value: 2.9E-22
score: 77.9
IPR008893WGR domainSUPERFAMILY142921WGR domain-likecoord: 506..633
IPR012982PADR1 domainSMARTSM01335PADR1_2coord: 281..337
e-value: 1.0E-27
score: 108.1
IPR012982PADR1 domainPFAMPF08063PADR1coord: 282..336
e-value: 4.4E-21
score: 74.3
IPR001510Zinc finger, PARP-typeSMARTSM01336zf_PARP_3coord: 127..210
e-value: 3.8E-30
score: 116.2
coord: 11..87
e-value: 1.6E-33
score: 127.3
IPR001510Zinc finger, PARP-typePFAMPF00645zf-PARPcoord: 11..85
e-value: 8.4E-17
score: 61.7
coord: 127..207
e-value: 2.2E-19
score: 70.0
IPR001510Zinc finger, PARP-typeGENE3D3.30.1740.10coord: 1..111
e-value: 2.6E-29
score: 101.6
coord: 115..235
e-value: 9.2E-27
score: 93.3
IPR001510Zinc finger, PARP-typePROSITEPS00347PARP_ZN_FINGER_1coord: 136..173
IPR001510Zinc finger, PARP-typePROSITEPS50064PARP_ZN_FINGER_2coord: 8..90
score: 30.707
IPR001510Zinc finger, PARP-typePROSITEPS50064PARP_ZN_FINGER_2coord: 124..213
score: 30.827
IPR004102Poly(ADP-ribose) polymerase, regulatory domainGENE3D1.20.142.10coord: 633..782
e-value: 3.6E-52
score: 175.8
IPR004102Poly(ADP-ribose) polymerase, regulatory domainPFAMPF02877PARP_regcoord: 652..783
e-value: 7.1E-48
score: 162.0
IPR004102Poly(ADP-ribose) polymerase, regulatory domainPROSITEPS51060PARP_ALPHA_HDcoord: 651..768
score: 38.531
IPR004102Poly(ADP-ribose) polymerase, regulatory domainSUPERFAMILY47587Domain of poly(ADP-ribose) polymerasecoord: 651..784
NoneNo IPR availableGENE3D3.90.228.10coord: 783..888
e-value: 3.8E-32
score: 111.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..509
NoneNo IPR availableCDDcd01437parp_likecoord: 651..887
e-value: 6.80957E-113
score: 351.187
NoneNo IPR availableCDDcd08001WGR_PARP1_likecoord: 529..635
e-value: 4.19656E-51
score: 173.935
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 121..221
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..88
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 786..887
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 797..887
e-value: 2.5E-35
score: 121.8
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPROSITEPS51059PARP_CATALYTICcoord: 777..888
score: 55.724
IPR003034SAP domainPROSITEPS50800SAPcoord: 255..289
score: 8.768

Blast
[Close]
BLAST of TCONS_00026089-protein vs. Swiss-Prot (Human)
Match: PARP1 (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4)

HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0
Identity = 424/918 (46.19%), Postives = 585/918 (63.73%), Query Frame = 0 
Query:    3 ADDPPYSVEYAKSGRASCKGCKNTISQATLRIARMVQSPHFDGKVPNWFHFHCFFAKFKAKEEGDF--GKFDSIRWDDQERLREKLNNSGGVTGAASGGKSKKKTKNGSVDVVDGPSSRETMEFSIEYAKSSRAKCRKCEEKIEKGVIRISKLMEPEEKKFAAQVPHWHHVECFLLRREELEAET-FGAADIPGFSSLSAEDQKEVSAKVARPKTNTKKLKQEEKPSKEEQKKANAE--------KDAQKKQNDRYWKVRDGLYQACTNSDLKTMLSANGYDTTGGEDSLLDRCADGVLFGALELCPECKNGRLVLSTTKNGYKCTGNVSGWTACTYLTQKPARKMWLIPTDLRKESDFLTKIKLKVRERIFP-------------NKLQKDEVKEEKEVEGKPLQNKIMVLVGRLKQTQSELKEKVENLGGSITSTPTPDCFCCISNPGEVAKGSVKMGTVEKYNIPVVTEEYL-DALDKTGGAKKILTQYAIAPWGGNR-----EQVNTSSKSQGTKRKNTAAENASGG--GASKKSKLTVKGGAVVDTDTDLEDTHHILNTNKVVYAAVLGLVDLSRGSNSYYKLQILEPDDTKKTRFYYLFRAWGRVGTSIGGNKLEKFLNKENAIEHFEDLYYEKTGNEWGNRTNFVKQPNKFYPLDIDYGQEDEEVQS-RIAPGSKSTLSKPTQELMKMIFDIEEMKHALLEFEIDLKKMPLGKLSKKQIETAYTCLTECQRYLQDEVTGSKILDASNRFFTLIPHDFGLKTPPLLDNEDIINSKVKMLDSLLEIEIAYSLLKGGSADQEQDPLDVHYTSLKADIKEVDKESDEYKMICEYVQNTHAKTHSHYKLKVQEVFAVDRKGEKKRYRAFRDLPNRQLLWHGSRRTNFAGIISQGLRIAPPEAPVTGYMFGKGVYFA 887
            + D  Y VEYAKSGRASCK C  +I + +LR+A MVQSP FDGKVP+W+HF CF+    +    D     F  +RWDDQ++++ K   +GGVTG    G   K  K                +F+ EYAKS+R+ C+ C EKIEKG +R+SK M   EK     +  W+H  CF+  REEL     + A+ + GFS L+ ED++ +  ++   K+  K+   E     E  KK + +        + A K QND  W ++D L + C+ +DLK +L  N      GE ++LDR ADG++FGAL  C EC +G+LV  +  + Y CTG+V+ WT C   TQ P RK W+ P + R E  +L K+K+K ++RIFP             +               KPL N  ++ +G+L + + E+K  +E LGG +T T      C IS   EV K + KM  V++ NI VV+E++L D    T   +++   + ++PWG        E V    KS     K +  +    G   + K+ KLT+KGGA VD D+ LE + H+L     V++A LGLVD+ +G+NSYYKLQ+LE  D K+ R Y++FR+WGRVGT IG NKLE+  +KE+AIEHF  LY EKTGN W ++ NF K P KFYPL+IDYGQ++E V+   + PG+KS L KP Q+L+KMIFD+E MK A++E+EIDL+KMPLGKLSK+QI+ AY+ L+E Q+ +    + S+ILD SNRF+TLIPHDFG+K PPLL+N D + +KV+MLD+LL+IE+AYSLL+GGS D  +DP+DV+Y  LK DIK VD++S+E ++I +YV+NTHA TH+ Y L+V ++F ++R+GE +RY+ F+ L NR+LLWHGSR TNFAGI+SQGLRIAPPEAPVTGYMFGKG+YFA
Sbjct:    4 SSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVK-KTAEAGGVTGKGQDGIGSKAEKT-------------LGDFAAEYAKSNRSTCKGCMEKIEKGQVRLSKKMVDPEKPQLGMIDRWYHPGCFVKNREELGFRPEYSASQLKGFSLLATEDKEALKKQLPGVKSEGKRKGDEVDGVDEVAKKKSKKEKDKDSKLEKALKAQNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEEC-SGQLVFKS--DAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFR-EISYLKKLKVKKQDRIFPPETSASVAATPPPSTASAPAAVNSSASADKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTANKASLC-ISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTKSLQELFLAHILSPWGAEVKAEPVEVVAPRGKSGAALSKKSKGQVKEEGINKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLE--DDKENR-YWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSK-NFTKYPKKFYPLEIDYGQDEEAVKKLTVNPGTKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFA 898
The following BLAST results are available for this feature:
BLAST of TCONS_00026089-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PARP10.000e+046.19Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=... [more]
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