TCONS_00025792-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00025792-protein
Unique Name	TCONS_00025792-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1401

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00025792-protein ID=TCONS_00025792-protein|Name=TCONS_00025792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1401bp
MCLSTDGTFKQPFWVTVTSKDHMQEKGVVLVQPCDEWNDFKGAEFMIYLM
RSKGHIYMVESPNYYRSYQPVFKTLQSLNVNRLSFKEELVKLEKGRLPDF
LNPSHTIDSRLVYRTPTIPDTSEPRKAKATSNSTINHDSPESNKPIVAVN
SLSSLPPNQTDSATNQINATTSSLAVTSNSVASEIAKSQSMSPPTTQTSS
FIMKLKKDIFLPPTPPQLPPTQLPSPTQPPPTPTPPPRDRAFTMQRENEK
HKITLEEFFDTSHSDVKSIFDPSQEEAVKTCLQNRIGIIQGPPGCGKTFI
GVQMVRLLLSLSSLHKPKIFVLTYKNHALDEFLKGISKYVGLSKLVRIGG
RCKDPALENITLRKLRKENQTEITEMVFKNRYEMDESRDTLRATFEEIRQ
LPYISYDQLYRSLSDAHVYSLLIGLDWDSLSSEETNCVTWQEVDNLLRGE
NSKSFEDIKFLYEIKDIAFNHWLPSQEEFDDCEYELTGGIQSIQTFSKLT
FKQPSEIDKVKKKKKGEKEEENGETMKSEEEIMEAEEEQMMFSEQRRSEF
VNEEFNSILKVDDGNSNHQGEQRVKGFCPQAIKKLTENGYNLPYFDEQED
VWQLSMPDRIRLVQLLIAKGTNEMLEKFQRSLREFKDECKQKAELETQNE
VEILKRKQIIAATVTGASINQELLREIKPQIVIVEEAAEVLEPQLVASIG
SWTKYMLLIGDHQQLRPSVDAYHLRKDYNFDISMMERLINNQMPYTTLQM
QNRQRVEFAELLLDIYPNLKTNHKRISGHKPATCLEKSVFFWDHQHEETK
ERSVRNEEEAKRAVDLGLFLVQQGYEPRKITILAMYRGQTKLIRDMIREH
VKIYSQLFSCDTRMNKLQTAMTTHADNRKSTTILESKQKQKAKEKPDEPN
VIKIHTVDMYQGDENDFVIVSLVRSNRERNIGFLSERNRRCVAQSRARCG
VYFIGNSSMFKEHKTWRPLISKLESDGCLGDKIGLVCKDHPEASFKVKDS
KLMALPKLKNFCQQPCGREMDCGKHFCKEGCQVPHTHSKSACKELVLFED
ERCQLHHEPYQRPCCSLRNFCKKLVPFTFEKCGHDAFKECYKKAAWLECE
TPVLHAMVCGHVQSKQCHEDGSKIKCKEKCQRKMSCGHICSGGHKCFEHS
NKKSCRDCTNIERAERKKRRKAEEEQRKANERNVKEHIKKLENSEDFEKM
WCTELTRENPETIEKYLRIQDAVKKAINQGHRLFPKITKIEEVRNLKVHA
KFLEKSLHLYENEIKSESKLFFHGVNDTMLESILKDGFTLPDESRSYGAG
IYLTIDSTQSRNESQSDQSGKMLYCQVHLGRSWTAKEESPDFNAESLRKL
KKDSVFAPRSTKEEGGESLSDQYIVFNPDQVLPSYVISYDLEFQPSFIEV
F

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_014490	XLOC_014490	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00025792	TCONS_00025792	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012317	Poly(ADP-ribose)pol_cat_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003950	NAD+ ADP-ribosyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003950	NAD+ ADP-ribosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1243..1263
None	No IPR available	COILS	Coil	Coil	coord: 618..645
None	No IPR available	COILS	Coil	Coil	coord: 1158..1190
None	No IPR available	COILS	Coil	Coil	coord: 518..553
None	No IPR available	GENE3D	3.90.228.10		coord: 1195..1394 e-value: 6.1E-27 score: 93.9
None	No IPR available	GENE3D	3.40.50.300		coord: 596..752 e-value: 7.4E-9 score: 34.7
None	No IPR available	GENE3D	3.40.50.300		coord: 175..453 e-value: 5.6E-14 score: 51.4
None	No IPR available	PFAM	PF13086	AAA_11	coord: 271..553 e-value: 4.9E-13 score: 49.4 coord: 626..719 e-value: 1.5E-13 score: 51.1
None	No IPR available	PFAM	PF13087	AAA_12	coord: 731..957 e-value: 1.1E-30 score: 106.7
None	No IPR available	GENE3D	3.40.50.300		coord: 753..979 e-value: 3.5E-24 score: 84.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 510..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..897
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..145
None	No IPR available	SUPERFAMILY	56399	ADP-ribosylation	coord: 1214..1393
IPR012317	Poly(ADP-ribose) polymerase, catalytic domain	PFAM	PF00644	PARP	coord: 1214..1389 e-value: 1.0E-17 score: 64.3
IPR012317	Poly(ADP-ribose) polymerase, catalytic domain	PROSITE	PS51059	PARP_CATALYTIC	coord: 1175..1398 score: 12.125
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 395..480 coord: 621..850 coord: 269..340 coord: 898..969

Blast

[Close]

BLAST of TCONS_00025792-protein vs. Swiss-Prot (Human)
Match: ZNFX1 (NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 2.994e-77
Identity = 190/605 (31.40%), Postives = 287/605 (47.44%), Query Frame = 0

Query:  596 DEQEDVWQLSMPDRIRLVQLLIAKGTNEMLEKFQRSLREFKDECKQKAELETQNEVEILKRKQIIAATVTGASINQELLREIKPQIVIVEEAAEVLEPQLVASIGSWTKYMLLIGDHQQLRPSVDAYHLRKDYNFDISMMERLINNQMPYTTLQMQNRQRVEFAELLL-DIYPNLKTNHKRISGHKPATCLEKSVFFWDH---QHEETKERSVRNEEEAKRAVDLGLFLVQQGYEPRKITILAMYRGQTKLIRDMIREHVKIYSQLFSCDTRMNKLQTAMTTHADNRKSTTILESKQKQKAKEKPDEPNVIKIHTVDMYQGDENDFVIVSLVRSNRERNIGFLSERNRRCVAQSRARCGVYFIGNSSMFKEHKTWRPLISKLESDGCLGDKIGLVCKDHPEASFKV-KDSKLMALPKLKNFCQQPCGREMDCGKHFCKEGCQVPHTHSK------SACKELVLFEDERCQLHHEPYQRPCCSLRNFCKKLVPFTFEKCGHDAFKECYKKAAWLECETPVLHAMVCGHVQSKQCHED--------------------------------GSKIKCKEKCQRKMSCGHICSGG-HKCFEHSNKKSCR 1156
            +E EDVWQL +  R +L +L +     +   K     R+++   ++ AEL  Q ++ ILK  Q++  T TGA+  +++L++++P+IVIVEEAAEVLE   +A++    ++++LIGDHQQLRPS + Y L K++N ++S+ ERL+   +P+  L  Q+R   E A LL   IY +L+ NH  +  ++    +  ++FF +H   + E  + +S +N+ EA   V+L  + + Q Y P +ITIL  Y GQ   +R                     KL  A T                             +++H VD YQG+END +++SLVRSN+E  +GFL   NR CVA SRA+ G+Y IGN  M  +   W  +I  L  +  +G  + L C++HPE    V K S    +P  +  C  PC   + CG H C   C  P+  S         C++++  E  RC L        C      C+  VP T  +CGH+    C    +   C+ P   ++ CGH  S  C ED                                G  +KC  KC   + CGH C G  H CFE    + C+
Sbjct:  917 NEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQDLE-NHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLR---------------------KLMPAKTFAG--------------------------VRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPMLRLCCQNHPETHTLVSKASDFQKVP--EGGCSLPCEFRLGCG-HVCTRACH-PYDSSHKEFQCMKPCQKVICQEGHRCPL-------VCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQ 1462

HSP 2 Score: 87.4261 bits (215), Expect = 4.951e-17
Identity = 62/178 (34.83%), Postives = 90/178 (50.56%), Query Frame = 0

Query:  270 FDPSQEEAVKTCLQNRIGIIQGPPGCGKTFIGVQMVRLLLSLS-----SLHKPKIFVLTYKNHALDEFLKGISKYVGLSKLVRIGGRCKDPALENITLRKLRKENQ-------------TEITEMVFKNRYEMDESRDTLRATFEEIRQLPYISYDQLYRSLSDAHVYSLLIGLDWDS 429
             D SQ EA++  L   + IIQGPPG GKT++G+++V+ LL+       SL K  I V+ Y NHALD+FL+GI      S +VR+GGR     L+  TLR+LR + +               I   + ++  E+ E   TL  T   + +  Y     L + +S  H  SL+ G   DS
Sbjct:  598 LDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNHALDQFLEGIYNCQKTS-IVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMTQMKESEQELHEGAKTLECTMRGVLREQY-----LQKYISPQHWESLMNGPVQDS 769

The following BLAST results are available for this feature:

BLAST of TCONS_00025792-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00025792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZNFX1	2.994e-77	31.40	NFX1-type zinc finger-containing protein 1 OS=Homo...	[more]

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TCONS_00025792-protein (polypeptide) - C. hemisphaerica