TCONS_00024892-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024892-protein
Unique NameTCONS_00024892-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024892-protein ID=TCONS_00024892-protein|Name=TCONS_00024892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
SSSTGRHKMLACKRLNDTTHNTPDNKMHILGHFVGKQYNAIVAQPITPQD
MNELKSAFASFDKNDDGFISKEELSEAMACLGHKISNEELDDIIKAVDID
GNGLVDFKEFINLMDNNCLVQSMDEEMQHLFQMIDKNNDGYITEKEIKAM
LKGMGEKVRKKDIRKMIKEADQNKDGKISFNEFKTMVQNGNYLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013987XLOC_013987Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024892TCONS_00024892Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 89..117
e-value: 9.3E-4
score: 28.5
coord: 53..81
e-value: 3.0E-6
score: 36.8
coord: 126..154
e-value: 3.0E-6
score: 36.7
coord: 162..190
e-value: 3.4E-7
score: 39.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 52..114
e-value: 4.7E-15
score: 55.7
coord: 125..188
e-value: 2.4E-16
score: 59.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 85..120
score: 12.756
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 49..84
score: 16.271
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 122..157
score: 15.573
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 158..193
score: 14.848
IPR002048EF-hand domainCDDcd00051EFhcoord: 126..188
e-value: 2.84256E-17
score: 71.8101
IPR002048EF-hand domainCDDcd00051EFhcoord: 53..114
e-value: 1.77181E-17
score: 72.1953
NoneNo IPR availableGENE3D1.10.238.10coord: 142..194
e-value: 5.6E-20
score: 70.5
NoneNo IPR availableGENE3D1.10.238.10coord: 79..102
e-value: 4.8E-15
score: 54.9
NoneNo IPR availableGENE3D1.10.238.10coord: 40..78
e-value: 1.2E-14
score: 53.5
NoneNo IPR availableGENE3D1.10.238.10coord: 103..141
e-value: 1.6E-17
score: 62.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 135..147
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 62..74
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 98..110
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 171..183
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 43..191

Blast
[Close]
BLAST of TCONS_00024892-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.278e-31
Identity = 54/146 (36.99%), Postives = 92/146 (63.01%), Query Frame = 0 
Query:   42 VAQPITPQDMNELKSAFASFDKNDDGFISKEELSEAMACLGHKISNEELDDIIKAVDIDGNGLVDFKEFINLMDNNCLVQSMDEEMQHLFQMIDKNNDGYITEKEIKAMLKGMGEKVRKKDIRKMIKEADQNKDGKISFNEFKTMV 187
            +A  +T + + E K AF+ FDK+ DG I+ +EL   M  LG   +  EL D+I  VD DGNG +DF EF+ +M         +EE++  F++ DK+ +GYI+  E++ ++  +GEK+  +++ +MI+EAD + DG++++ EF  M+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00024892-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.278e-3136.99Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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