TCONS_00023982-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00023982-protein
Unique Name	TCONS_00023982-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	418

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00023982-protein ID=TCONS_00023982-protein|Name=TCONS_00023982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
EKKLRENNTESAEGSQQKGAEAKPKSKIDYARNFPLSEEKGNAAFVKMYS
KTTSLKLNDVAEFICILSVDPHFAQSSMQEEMETNEVTWHEFNMEEDRAH
CPPPSLVPRLHCLYYNKLEELNPNVRNNHTDYECASKELTSIRADLIQTL
KGLLGGDGIAAEYLLLHLISSVYGRVGAMCVGKFALNLFKLPNSGFCERL
YQFIEKIVPKSHYLPMSLNNLNNKQFIPSKDFQANRLTSGVLQLSSGTNL
ILDETQMEPGKLDTDGVKNLTALGNLIQWQKLEYDFTFNRLDIETNVNVL
VLSEGKSLLKCDCQLPINFEDTTKQTNATSEKLLQKFRYYLSNVRQMKYE
LTEEVQKALEDDFVEMRKEDSKAMNADAFYVLLTTARYLAISHGQSTLSA
ALWTRVKELDADLRKRLR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013468	XLOC_013468	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00023982	TCONS_00023982	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019140	MCM_complex-bd

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019140	Mini-chromosome maintenance complex-binding protein	PFAM	PF09739	MCM_bind	coord: 6..417 e-value: 1.3E-145 score: 486.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Blast

[Close]

BLAST of TCONS_00023982-protein vs. Swiss-Prot (Human)
Match: MCMBP (Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 2.759e-108
Identity = 181/411 (44.04%), Postives = 254/411 (61.80%), Query Frame = 0

Query:   33 NFPLSEEKGNAAFVKMYSKTTSLKLNDVAEFICILSVDPHFA--------QSSMQEEMETNEVTWHEFNMEEDRAHCPPPSLVPRLHCLYYNKLEELNP---NVRNNHTDYECA-----SKELTSIRADLIQTLKGLLGGDGIAAEYLLLHLISSVYGRVGAMCVGKFALNLFKLP-NSGFCERLYQFIEKIVPKSHYLPMSLNNLNNKQFIPSKDFQANRLTSGVLQLSSGTNLILDETQMEPGKLDTDGVKNLTALGNLIQWQKLEYDFTFNRLDIETNVNVLVLSEGKSLLKCDCQ-------LPINFEDTTKQ-TNATSEKLLQKFRYYLSNVRQMKYELTEEVQKALEDDFVEMRKEDSKAMNADAFYVLLTTARYLAISHGQSTLSAALWTRVKELDADLRKRLR 418
            NFPL  EKG A  VK+Y      K+ND+ E   ILSVDP  +         S++ + ME  +        EE R H PP SLVPR+H +   KL+ +NP      N      C        EL+ +RA+L+  L   L GD +AAEYL+LHLIS+VY R   + +GKF +NL   P NS F E LY+ I+ +VP S  L M++ N+N+ +FIP KD+ ANRL SG+LQL S T+L++DET +E G+LDT GV N+TAL NLI WQK++YDF++++++   N+NV + SEG+SLL  DCQ       +P N E+      +A    +L KFR YL+ +R ++Y +++E+ KA+EDDFVEMRK D +++ AD  + LL  AR L++S GQ+TLS   W R K+L++  R RL+
Sbjct:  228 NFPLPGEKGPACLVKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASALLDPMECTDTA------EEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLLSAVLPSVLNKFRIYLTLLRFLEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRRTRLQ 632

The following BLAST results are available for this feature:

BLAST of TCONS_00023982-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00023982-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MCMBP	2.759e-108	44.04	Mini-chromosome maintenance complex-binding protei...	[more]

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TCONS_00023982-protein (polypeptide) - C. hemisphaerica