TCONS_00023690-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023690-protein
Unique NameTCONS_00023690-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023690-protein ID=TCONS_00023690-protein|Name=TCONS_00023690-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MGDQPPSVYSRLEDVYNNVSVAKERLEEIRNHFLKKYDEEPTFYCRAPGR
VNIIGEHIDYCGYGVLPMALEQDIIIACSLSNDGKYRMSTTVDGMQDKEV
DLKDIEIKGHDWHDYYLCGHKAILAQGIDCLQGMKTLVDGTVPKSAGLSS
SSALVCCSALVSMTANNESFSRLVLGEACQKSEKYVGIEGGGMDQAISYL
AEKGTAKFVEFNPLRAVDVRLPNGVSFVIANSLREMTKSEDPGKYYNKRV
SECRIAAQILSKKFGKEWRKTRRLVDTQNVLEKTLPEMVELVEMLNKTPY
TREEICKELEITDDELITECLNPTTAQAQEFKLYNRAKHVYSEANRVLRY
KEVCASDVENKTKVLGDLMNESQESCSKDYECSCAELDELTEICRNAGAL
GSRLTGAGWGGCTVSLVPTEKVDEFISKVKTQYYDPQPTRRERVKEALFA
TEPGSGAAVLKNVEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013305XLOC_013305Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023690TCONS_00023690Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000705Galactokinase
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR019539GalKase_gal-bd
IPR006204GHMP_kinase_N_dom
IPR006206Mevalonate/galactokinase
IPR013750GHMP_kinase_C_dom
IPR019741Galactokinase_CS
IPR006203GHMP_knse_ATP-bd_CS
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004335galactokinase activity
GO:0005524ATP binding
GO:0005534galactose binding
GO:0016301kinase activity
GO:0016773phosphotransferase activity, alcohol group as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006012galactose metabolic process
GO:0046835carbohydrate phosphorylation
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006012 galactose metabolic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0004335 galactokinase activity
molecular_function GO:0005534 galactose binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availablePRINTSPR00959MEVGALKINASEcoord: 182..201
score: 33.97
coord: 47..71
score: 54.94
coord: 401..418
score: 60.78
coord: 140..162
score: 41.05
IPR000705GalactokinasePRINTSPR00473GALCTOKINASEcoord: 49..67
score: 69.74
coord: 335..349
score: 51.33
coord: 133..151
score: 50.79
IPR000705GalactokinaseTIGRFAMTIGR00131TIGR00131coord: 27..436
e-value: 3.0E-92
score: 307.5
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 14..226
e-value: 1.1E-51
score: 174.9
IPR019539Galactokinase galactose-binding domainPFAMPF10509GalKase_gal_bdgcoord: 32..79
e-value: 8.0E-23
score: 79.7
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 138..200
e-value: 1.3E-10
score: 41.2
IPR006206Mevalonate/galactokinasePIRSFPIRSF000530Galactokinasecoord: 14..461
e-value: 6.9E-128
score: 423.8
IPR013750GHMP kinase, C-terminal domainGENE3D3.30.70.890coord: 227..459
e-value: 2.8E-59
score: 199.2
IPR013750GHMP kinase, C-terminal domainPFAMPF08544GHMP_kinases_Ccoord: 365..434
e-value: 2.8E-12
score: 46.7
IPR013750GHMP kinase, C-terminal domainSUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 225..270
coord: 315..458
IPR019741Galactokinase, conserved sitePROSITEPS00106GALACTOKINASEcoord: 49..60
IPR006203GHMP kinase, ATP-binding, conserved sitePROSITEPS00627GHMP_KINASES_ATPcoord: 142..153
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 17..222

Blast
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BLAST of TCONS_00023690-protein vs. Swiss-Prot (Human)
Match: GALK2 (N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1)

HSP 1 Score: 431.024 bits (1107), Expect = 1.714e-148
Identity = 229/447 (51.23%), Postives = 298/447 (66.67%), Query Frame = 0 
Query:   19 VSVAKE-RLEEIRNHFLKKYDEEPTFYCRAPGRVNIIGEHIDYCGYGVLPMALEQDIIIACSLSNDGKYRMSTTVDGMQDKEVDLKDIEIKGHD--WHDYYLCGHKAILAQ-GIDCLQGMKTLVDGTVPKSAGLSSSSALVCCSALVSMTANNESFSRLVLGEACQKSEKYVGIEGGGMDQAISYLAEKGTAKFVEFNPLRAVDVRLPNGVSFVIANSLREMTKSEDPGKYYNKRVSECRIAAQILSKKFGKEWRKTRRLVDTQNVLEKTLPEMVELVE-MLNKTPYTREEICKELEITDDELITECLNPTTAQAQEFKLYNRAKHVYSEANRVLRYKEVCASDVENKTKVLGDLMNESQESCSKDYECSCAELDELTEICRNAGALGSRLTGAGWGGCTVSLVPTEKVDEFISKVKTQYYDPQPTRRERVKEALFATEPGSGAAVL 460
            V VA+  RL +++  F  K+   P FY RAPGRVNIIGEHIDYCGY VLPMA+EQD++IA         +++ T     D      +I+I      WH+Y+LCG K I    G+  L GM  LVDG +P S+GLSSSSALVCC+ LV++T    + S++ L E C KSE+Y+G EGGGMDQ+IS+LAE+GTAK +EF+PLRA DV+LP+G  FVIANS  EM K+     ++N RV ECR+AA++L+K    +W K  RL + Q  L  +L EM+ + E  L+  PY  EEIC+ L I+ +EL T+ L+P T     FKLY RAKHVYSEA RVL++K++C    EN  ++LG+LMN+S  SC   YECSC ELD+L +ICR  GA GSRLTGAGWGGCTVS+VP +K+  F++ V   YY          K++LFAT+PG GA VL
Sbjct:   11 VQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAAT--SHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVL 455
The following BLAST results are available for this feature:
BLAST of TCONS_00023690-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GALK21.714e-14851.23N-acetylgalactosamine kinase OS=Homo sapiens GN=GA... [more]
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