TCONS_00023432-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023432-protein
Unique NameTCONS_00023432-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023432-protein ID=TCONS_00023432-protein|Name=TCONS_00023432-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MAQTQLTFARVIMHIVAFIFLAGYMLYQKVPLVQGMFMFAVCVFYWLIYL
SYVIVNNMKPKTPKFKLVGKRVVITGGSSGIGFELAKLCVEAECSKVVII
ARNEGRLKAKVAELKEMLSTDDQVISCLSLDLSSDGAEIANRMKRLGGVD
LLVNCAGYSVPGEFENLDTNVFEDMIKANYLSAVHTTHAIVPSMIEKKQG
QIVFLSSVGGQLGIYGFTGYSGSKYAIRGFAEVLYHELRPYDIGVSLAFP
PDTKTPGFDKEMEQKPKLCQAISEQAGLWEVEDVAKIIKDGIVKRKFMIG
FGSDGYFMNALSAGASPANSVLEFWVHSFLGPILRVYMLFLQNMWTNMID
NELKTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013183XLOC_013183Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023432TCONS_00023432Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 200..208
score: 46.32
coord: 220..239
score: 32.83
coord: 147..158
score: 52.45
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 194..210
score: 33.62
coord: 71..88
score: 42.58
coord: 147..158
score: 50.0
coord: 220..239
score: 31.07
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 70..264
e-value: 7.5E-44
score: 149.4
NoneNo IPR availableSMARTSM00822PKS_KRcoord: 70..252
e-value: 0.0039
score: -55.7
NoneNo IPR availableGENE3D3.40.50.720coord: 63..283
e-value: 1.5E-44
score: 151.5
NoneNo IPR availableCDDcd08939KDSR-like_SDR_ccoord: 69..299
e-value: 8.07203E-81
score: 248.322
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 63..299

Blast
[Close]
BLAST of TCONS_00023432-protein vs. Swiss-Prot (Human)
Match: KDSR (3-ketodihydrosphingosine reductase OS=Homo sapiens GN=KDSR PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 4.977e-73
Identity = 123/289 (42.56%), Postives = 181/289 (62.63%), Query Frame = 0 
Query:   62 TPK-FKLVGKRVVITGGSSGIGFELAKLCVEAECSK----VVIIARNEGRLKAKVAELKEMLSTDDQVISCLSLDLSSDGAEIANRMK----RLGGVDLLVNCAGYSVPGEFENLDTNVFEDMIKANYLSAVHTTHAIVPSMIEKKQGQIVFLSSVGGQLGIYGFTGYSGSKYAIRGFAEVLYHELRPYDIGVSLAFPPDTKTPGFDKEMEQKPKLCQAISEQAGLWEVEDVAK-IIKDGIVKRKFMIGFGSDGYFMNALSAGASPANSVLEFWVHSFLGPILRVYMLF 340
            +PK   L G  VV+TGGSSGIG      C+  EC K    + ++ARNE +L     E++     D QV+ C+S+D+S D  ++ N +K    +LG VD+LVNCAG +V G+FE+L+ + FE ++  NYL +V+ + A++ +M E++ G+IVF+SS  GQLG++GFT YS SK+AIRG AE L  E++PY++ +++A+PPDT TPGF +E   KP   + ISE   + + E VAK I+KD I +  F    GSDGY ++AL+ G +P  S+ E         + R   LF
Sbjct:   24 SPKPLALPGAHVVVTGGSSGIG-----KCIAIECYKQGAFITLVARNEDKLLQAKKEIEMHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFERLMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFAEENRTKPLETRLISETTSVCKPEQVAKQIVKDAI-QGNFNSSLGSDGYMLSALTCGMAPVTSITEGLQQVVTMGLFRTIALF 306
The following BLAST results are available for this feature:
BLAST of TCONS_00023432-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDSR4.977e-7342.563-ketodihydrosphingosine reductase OS=Homo sapiens... [more]
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