TCONS_00023192-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023192-protein
Unique NameTCONS_00023192-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023192-protein ID=TCONS_00023192-protein|Name=TCONS_00023192-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1151bp
MAGMNDLKDEMDEEKLQLLDNVKKECKKLMEEAVTRKFIHVDSSSVTSLC
SAVEACLLHRLKKRIGGLLPASDCSADLLHKITRLSPDAQSINILTNYLH
HVQDTKNTFPSLNEKTGIELKSPEKKRLNGYTTTGFSKKYLWIRIALLEK
VLTNIVKTLIANWREFYEIDALLADQVHGPSLVWLLDGPDSLDYSKMKTP
DNSWSDPSAQELVQRHRIYSSPSLSHKSVTPHRRRLFTTSSAKLNSSIPG
VPMQAREHVGSLHQNGESQLLFGKNNVKLTVTGSPSSVQGYLSLHKSIDS
LLLKWTPNPMLHDDTISVQSEKSHFWNQAITVDLIDVVYLHCHSSGEQGG
NVVLITQDGVQLPPLSFPSGNSLLSFLTCLEQGLGPDGRLDPPLFHKSSS
SVTWPRLKKNILPDRLIHAFQSQDSKKGDSLGGTGPSQDFVFRLIFTSPT
SGIDKSELRKLISTDNAAAATKLINSSVNSWKAKEIGAKSSLVPKMHTPR
VRLSRSFSVPSKIALNLACEKMKYQIISRAFHGWVASYRHLKTVRTHLAS
LVLHDTPTNDDDLPDDVHQGLTHIIWKNMRAKGLSRNKELIKLYVYYGGI
EPSIRKEVWPYLLDSYPFTSDTNHIKDLEKANRDNYNHILEECKGIERIL
QEKEKDLLALNGFANGEVFQHSDTESMKTCDTNENHSYANGNCGTVTSSA
YGDNLSRDISINSNISDPIPEYADRLHGQDSSLNETKDFSLIKSILETKD
SLREMVESASERGSTAWKRLTTKKSSSDHHRTKAFLANAKKTETFDDLHS
KFVPQAKSFDLELDCQTCGKKIIESRLGVLNGKLNDQSIEAVECFACLQE
RKCNERYEAEVSPYKIGCSPSSVVIDSNSRNGMSDYVVNINGEGTPIKRT
SISSAGSLYSEDLLKDYALNIHRIDKDVLRCDRNHPYFMPEKNLGKLRNV
IMCYVWEKLNIGYIQGMCDLCAPLLVIMDDEAKVFSCFMKLMDKMEANFP
HGNQMNEHLANINSLIQILDPELHEILDTPDDNTIFFFCYRWFLLDFKRE
LQYEDIYLVWETIWAASSVATEQFNLFVALAMIELYREIIIDNRMDMTDI
IKFFNEMAEQHDVKATLKLARNIVTKLQDIIHPSEPLIEQIPNIESMEIE
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013041XLOC_013041Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023192TCONS_00023192Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004012Run_dom
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 742..762
NoneNo IPR availableCOILSCoilCoilcoord: 1144..1151
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableGENE3D1.10.8.270coord: 618..993
e-value: 6.4E-24
score: 83.8
NoneNo IPR availableSUPERFAMILY140741RUN domain-likecoord: 134..196
coord: 13..103
IPR004012RUN domainSMARTSM00593893paper3coord: 139..199
e-value: 6.4E-10
score: 49.0
IPR004012RUN domainPFAMPF02759RUNcoord: 48..199
e-value: 1.2E-20
score: 73.7
IPR004012RUN domainPROSITEPS50826RUNcoord: 40..202
score: 19.257
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 596..1094
e-value: 2.5E-37
score: 140.0
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 919..1090
e-value: 5.9E-34
score: 117.5
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 599..1067
score: 29.329
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1003..1125
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 907..1024
coord: 574..638

Blast
BLAST of TCONS_00023192-protein vs. Swiss-Prot (Human)
Match: SGSM1 (Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1 SV=2)

HSP 1 Score: 422.55 bits (1085), Expect = 7.417e-129
Identity = 261/690 (37.83%), Postives = 374/690 (54.20%), Query Frame = 0
Query:   13 EEKLQLLDNVKKECKKLMEEAVTRKFIHVDSSSVTSLCSAVEACLLHRLKKRIGGLLPASDCSADLLHKITRLSPDAQSINILTNYLHH-VQDTKNTFPSLNEKTGIELKSPEKKRLNGYTTTGFSKKYLWIRIALLEKVLTNIVKTLIANWREFYEIDALLADQVHGPSLVWLLDGPDSLDYSKMKTPDNSWSDPSAQELVQRHRIYSSPSLSHKSVTPHRRRLFTTSSAKLNSSIPGVP-MQAREHVGSLHQNGESQLLFGKNNVKLTVTGSPSSVQGYLSLHKSIDSLLLKWTPNPMLHDDTISVQSEKSHFWNQAITVDLIDVVYLHCHSSGEQGGNVVLITQDGVQLPPLSFPSGNSLLSFLTCLEQGLGPDGRLDPPLFHKSSSSVTWPRLKKNILPDRLIHAFQSQDSKKGDSLGGTGPSQDFVFRLIFTSPTSGIDKSELRKLISTDNAAAA--------TKLINSSVNSWK-AKEIGAKSSLVPKMHTPRVRLSRSFSV---PS-------------------------------KIALNLACEKMKYQIISRAFHGWVASYRHLKTVRTHLASLVLHDTPTNDDDLPDDVHQGLTHIIWKNMRAKGLS-RNKELIKLYVYYGGIEPSIRKEVWPYLLDSYPFTSDTNHIKDLEKANRDNYNHILEECKGIERILQEKEKD 656
            E + +LL  VKKE K++MEEAVTRKF+H DSS + S C+AVEAC+LH L++R  G L ++  +A L  K+ +  P A+ ++     L   ++  +N    L E      K P          +  + K+LWIR AL EKVL  IV  L+ N  ++YE +ALL D V GP L  LL GP +L+Y+KMKT D+ W+DPSA ELVQRHRI+SS     +  +P +R          + S+   P + AR++V SLHQN  + LL+GKNNV +       +V GYLSLH++ D + LKWTPN +++     +  EKS +W+ A+T+ L ++VYLHCH   + GG VVL++QDG+Q PP  FP G  LL FL+CLE GL P G+LDPPL+ +      +P+L+K         + +S  S K D       + D+VFR+I+    S     +     S+ +   A        + L+ +  + W+ A+      +  PK   P  +     SV   PS                               +  L L C+ MKYQI+SRAF+GW+A  RHL TVRTHL++LV H   +   DLP D  QGLT  IW+       S   +EL++L +YYGGI+P IRK VWP+LL  Y F       K++++     Y   + E  G E I++++E++
Sbjct:    9 ETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKIAA-LFMKVGKNFPPAEDLSRKVQDLEQLIESARNQIQGLQENVRKLPKLP--------NLSPLAIKHLWIRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCALEYTKMKTADHFWTDPSADELVQRHRIHSSHV---RQDSPTKRPALCIQKRHSSGSMDDRPSLSARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSVGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQG----SAESTSSDKDDD-----EATDYVFRIIYPGMQSEFVAPDFLGSTSSVSVGPAWMMVPAGRSMLVVARGSQWEPARWDTTLPTPSPKEQPPMPQDLMDVSVSNLPSLWQPSPRKSSCSSCSQSGSADGSSTNGCNHERAPLKLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVS--PDLPCDAGQGLTARIWEQYLHDSTSYEEQELLRL-IYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAEWLGCEAIVRQRERE 674          

HSP 2 Score: 317.005 bits (811), Expect = 8.516e-91
Identity = 141/232 (60.78%), Postives = 182/232 (78.45%), Query Frame = 0
Query:  900 TSISSAGSLYSEDLLKDYALNIHRIDKDVLRCDRNHPYFMPEKNLGKLRNVIMCYVWEKLNIGYIQGMCDLCAPLLVIMDDEAKVFSCFMKLMDKMEANFPHGNQMNEHLANINSLIQILDPELHEILDTPDDNTIFFFCYRWFLLDFKRELQYEDIYLVWETIWAASSVATEQFNLFVALAMIELYREIIIDNRMDMTDIIKFFNEMAEQHDVKATLKLARNIVTKLQDII 1131
            + +SS+G  YS +LL  Y +N+HRI+KDV RCDRN+ YF P  NL KLRN++  Y+W+ + IGY+QGMCDL APLLVI+DDEA  FSCF +LM +M  NFPHG  M+ H AN+ SLIQILD EL E++    D T F+FCYRWFLLDFKREL Y+D++LVWETIWAA  V++  + LF+ALA++E+YR+II++N MD TDIIKFFNEMAE+H+ K  LKLAR++V K+Q +I
Sbjct:  915 SPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTP-ANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVYKVQTLI 1145          
The following BLAST results are available for this feature:
BLAST of TCONS_00023192-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGSM17.417e-12937.83Small G protein signaling modulator 1 OS=Homo sapi... [more]
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