TCONS_00023132-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023132-protein
Unique NameTCONS_00023132-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length201

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023132-protein ID=TCONS_00023132-protein|Name=TCONS_00023132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MSQKIGKLMQNNTAFFLCDIQDKFRNSITYFPEIVIVAQRLLKAAKILNV
PVVATEQYPRGLGNTVPELAEILKENENAKVYDKTLFSMCTDNIMTDLRS
KVPDLKSVVLFGIEAHVCVQQTALELLDQGLEVHLIADSTSSRSMTDRMF
TFERIRQAGGFITTSESLLFMLLKDAKHPNFKEVQKLIIESAPYQGLVPK
L
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013002XLOC_013002Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023132TCONS_00023132Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000868Isochorismatase-like
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000868Isochorismatase-likePFAMPF00857Isochorismatasecoord: 13..166
e-value: 4.0E-29
score: 101.9
IPR000868Isochorismatase-likeSUPERFAMILY52499Isochorismatase-like hydrolasescoord: 1..194
NoneNo IPR availableGENE3D3.40.50.850coord: 1..201
e-value: 7.5E-46
score: 155.9
NoneNo IPR availableCDDcd01012YcaC_relatedcoord: 14..174
e-value: 3.07288E-61
score: 189.343

Blast
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BLAST of TCONS_00023132-protein vs. Swiss-Prot (Human)
Match: ISOC1 (Isochorismatase domain-containing protein 1 OS=Homo sapiens GN=ISOC1 PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 2.277e-67
Identity = 101/198 (51.01%), Postives = 141/198 (71.21%), Query Frame = 0 
Query:    5 IGKLMQNNTAFFLCDIQDKFRNSITYFPEIVIVAQRLLKAAKILNVPVVATEQYPRGLGNTVPELAEILKENENAK-VYDKTLFSMCTDNIMTDLRSKVPDLKSVVLFGIEAHVCVQQTALELLDQGLEVHLIADSTSSRSMTDRMFTFERIRQAGGFITTSESLLFMLLKDAKHPNFKEVQKLIIESAPYQGLVPKL 201
            +G L  ++T FF CD+Q++FR +I YF +I+ V QRLL+ A+IL +PV+ TEQYP+GLG+TV E+     +    K V  KT FSM    +   L +++P ++SVVLFG+E HVC+QQTALEL+ +G+EVH++AD+TSSRSM DRMF  ER+ + G  +TTSE++L  L+ D  HP FKE+Q LI  SAP  GL+ K+
Sbjct:  107 LGNLTPSSTVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIVTEQYPKGLGSTVQEI-----DLTGVKLVLPKTKFSMVLPEVEAAL-AEIPGVRSVVLFGVETHVCIQQTALELVGRGVEVHIVADATSSRSMMDRMFALERLARTGIIVTTSEAVLLQLVADKDHPKFKEIQNLIKASAPESGLLSKV 298
The following BLAST results are available for this feature:
BLAST of TCONS_00023132-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISOC12.277e-6751.01Isochorismatase domain-containing protein 1 OS=Hom... [more]
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