TCONS_00022880-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022880-protein
Unique NameTCONS_00022880-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022880-protein ID=TCONS_00022880-protein|Name=TCONS_00022880-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MSWLNNPAFLQRETSVLENRHRFGMKELERACEGFTPSVIFVDKLDVLRV
VCDGLRRSKELAVDCEGVELGRDGKLTLIQLMADEDTIFLIDVLVLGNNA
FAYGLKEILESTEVVKLMFDCRRDSDTLWQEFGVRLTNVLDMQLFEYMVR
EVAGYQLPTPAKPWHWRRPVVFGLDATVDKYVRSNDKSSMGILDVKRLPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012858XLOC_012858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022880TCONS_00022880Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006139 nucleobase-containing compound metabolic process
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 41..174
e-value: 5.9E-14
score: 52.1
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 24..192
e-value: 1.1E-23
score: 83.1
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 23..167

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022880-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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