TCONS_00022875-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022875-protein
Unique NameTCONS_00022875-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3387

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022875-protein ID=TCONS_00022875-protein|Name=TCONS_00022875-protein|organism=Clytia hemisphaerica|type=polypeptide|length=3387bp
MSWAQDEWKNNLPHVAVQKINAMEKNIEQLQKDQQQKKFKIESLEASNEH
QRKKTDQEKAEAANLKKEIHGLEEQIRSISVSHDKVLHELSTKDNRISCL
DGQLSKMKSSLDKENNSVAKLKMELERAVASQNKNLELLEQKDQDIAKLS
KRLKLSSSDDVFNAAPANKNNSSSEQSQADVSSLINFDESTEKVSNAAPP
DLLQFGNTPQKPASKSSQSSQNSNTFNIFGDTLMDYAETATESSQQGPDT
DMKAKINELEGSIRKYEHEINLMKSNSKDFRLSYDKLKAECDSKTMRCEK
MEHEIIKLTSSMDEATMKYEEQTTSLKKLQKQYECERHNNQAAVKAQEEK
MKEQEKNMREEIALDQKARKDELQAMENQIQEVERKHCETQREYQALECQ
HHQLNVEKQTLKREIDEHLTSISQLKLNHQHYVDQMKAELEEVHKKQIAS
YDMKLQETKRELSAAQELSNSAKNDIIASEKLVSELNLKCVQYEENIEKT
EKRVGQLQKQLEETQRQSQAKVKEIETQLTTKLKEREEAYTSSNKLLKES
QQKLEETTKELAVRKQNCQDLEFKLTSSETHVEKLKKESAEKEKDQNSII
REFETREKEMEKAFEQFKQEAKVSKEREKLSKDALERSTFENEQTKXREQ
LSKDALERSTFENEQTKKKITDLQKDITSLEQKLQENQKTNENYEKRLTG
LENEKRDLENKNQEFHRKQTKVDAELKEKEKSISTMQQENNKLKKDAEDL
AENVRLANEKKNVAEQKAREMDVNLHKAVKEKDQLTEAFSQEEREKEALN
SKYTDVSIKLDQSQQALHDLTKKTQTMERDFQEQYVKVKGQLDEVQQKNQ
EYQEQSQHVENALETLQNQKHHLENNIEIITEENEQLRRENNSSKAVIDE
LESQMRDVANKLTLSTEQCEELNVMIEDKERKNATLTEEFSKQEQESLIK
VNELKNTIRELTIKTEETEHEMETISQQSDQLRTANENLSKDHDSMAKEL
SSLSIAYGQLKDAKEKLVVQSSNSEQKLEEVTSMLQSKETALEQMKEQLE
TLHDDLRLRQQTYEDLLTEKNHVKSQLEMAQNDLEDLNEEMEDQRNQHQK
SVDELEQLSTLLNQKNSEIGELTEKLTRLESVLQTKEEELRTAQDQINLL
TQQVESLTAELSDTKEAYSVLQTENEELKMKIKTLDNELAEKSASIAALE
EKLAESDKDLQSRANQLAEMEQNIQALNQDLEESRKTLMSVETVKESLQK
QLEDMTQNCQTQSQSLDEKDALLVNLQTLLDRIQIELQNTNMKLVDTEKL
KSDLEQTVTSLKEEIQSKESTIDELNQNVGQLSQTCAEKEEALSTHADQI
SLLKDSLSQLQGHYQDVCNARDELKDIVGKQVAQITEFKEKLVAEEQRIE
ESLGREQEQQQELLLFKSQIEEMKNTIIGLETSIDEEKLSVATKEALISD
LETQIVKLDGEKQLAEAVVIATNEKFVSSESERQTLQASLKELENELSSR
NDEIMELKFCQEQVNNELARQNDLNEKIIKCKDEEIESLKAEEVLLTEKV
SICEKSIEEYKVESVESDEAMTLMKQELDVIQEKLKKKNKSLADLENQAE
ETDELIMKLKAEKASMETEHTKEIQQVKEAVTKKLGQNKALMDANFQMQN
KIVNYASQVDSLQTKLRQDQMQFADEKQLLTEELQQRQEQSEADVTRIGE
LEHLLNESQSKIQEVEGNLSESLAEHQKVMEKLNQDLVNGAETLNSKELA
IQQQQTALESVNEALSSCQKDLEEQKAAFENIDSQLKTTLEEKEALTKEN
LLQIEGLQNQNAELAIQISSLGERAQSFATLLDDQSNRWESNFSSLNTKL
DDCENHLVQLSQAKQAAEIKLEAKESVIASLKENLTSLENDFLTMDSKYK
ELFEDRSSIQNNLSEQNSKIEIDLKQKENDIESLKNQLKESFASIRQFEE
TSNQQNLHIQQVETSVTELNQEKQNLLESINQLTAQIETQTSDYENDIQT
LKNETEELVQKHQCEISELQKSHLLCDEEMMQKHTQEVEKLTEDVSCKVE
KIATLEGQIEDLGKEKTELMNVLEGIKQEAAEFEVQIQGQMDEQQKIEDE
RQSLKIQVESNKEKIAQQETINHELRQSNKNLQDDIAEMKTEYEEATIAF
EGKLQSQREEMESKMTALEKEQDELNLVYAQDMNELTSKVKTMESENKTL
STEFETLSVDKESLINKIAASKDQLDARHKENEELSVEMEDLKTNSEQLN
TELTTAKADLDAQRKHNGELVLSLDDKETMITSLKREADQLQENIVSLST
EIAGQKELLQQKEETIESLENQCEELKSNVAEREASLKDLQSEIEQLASD
KENLQNELKSTQTELEDAKAMIEELSNAKADLTYSLDGAQDEITNLKTLV
EKSETEKSETKEDVARLESALGEHERLLEEKTKELTSIQAKLDDVESTRD
GQESKISDIQTRLDESEASLQDANEKIESMFEEKTNLEDKLTNAEKIINE
MGSNLNEFKESLPKLQQDIDKLSQQKECLNKMNQDLQKSLDVEKSKKDEA
IQQVDSLSANVKDLQVERIKAIEQIQTLETEHRSLEKDFAESNESHETER
RQLTEEITRLKSDIKDLENKLEETETEVGEHVQNNEQVVNELQEKLDIAS
KDSERVTAELEKASQRIEGLLTSEEELKEKHENVTKKLEEKTDELTYTVT
IKEEMSDEANTLRDRLSKAVEKHESKTQECEQLQQALREEKSKSEETVEK
ASEEHQAEVEELRQHWEGVLAKMRENITSNNAKLHATEEERSYFETERDK
LKVCFDTLKEENDKVTAELEFTKGSSKSLEEEVNTLKQKRTQLIDQLNNE
KENSICHKAEITELNIALEESKRVSDKEKRKIKKLMHEAEKKDISINELE
QELQNKTVFMEAKDEELQGALKQIQEVEQSLELEKEKSQSQKKKLDDIRI
RLMPVKTDRDEDAEGDGDVDEYDFNSHILKLQETVALMESEQRKVIEEKV
EEERLQIVEQTKAFVMEREKVNEEQTRDLREKLESKEKRIETILKKLAHA
EEDCKEKQFQLEQEQISCEKLVAAAEERVSQAGNDGQKARFNGDELSELH
ERLQSAKTQNEDLRNDIAKMVDDYEKERDKEKREMKKLKTQNEKLKSQYE
KKDVELKKYMASSKEPIKNSKMLEDLRTKLLSSDEKFVEIQLEKEDLERL
MKTKSSDHEKEVNKLNKRLSSLLEDNERLRKKIEEISNMLSTLTKENSKF
KQERAQFPFLKGTGVTPLTQSMSGLKVLSTEEESTDSEAVTTDSSFKTPS
LPLRANETPKRSSDALSESYPSKSKRLRINSVIDENVETTTTSVSTLPGA
VPGSSSGISSKRRSSRIANSKPYKRETITISSSEDEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012855XLOC_012855Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022875TCONS_00022875Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3096..3162
NoneNo IPR availableCOILSCoilCoilcoord: 1850..1891
NoneNo IPR availableCOILSCoilCoilcoord: 656..721
NoneNo IPR availableCOILSCoilCoilcoord: 104..142
NoneNo IPR availableCOILSCoilCoilcoord: 366..428
NoneNo IPR availableCOILSCoilCoilcoord: 3205..3253
NoneNo IPR availableCOILSCoilCoilcoord: 1698..1732
NoneNo IPR availableCOILSCoilCoilcoord: 1028..1342
NoneNo IPR availableCOILSCoilCoilcoord: 1476..1503
NoneNo IPR availableCOILSCoilCoilcoord: 284..364
NoneNo IPR availableCOILSCoilCoilcoord: 810..946
NoneNo IPR availableCOILSCoilCoilcoord: 2819..2853
NoneNo IPR availableCOILSCoilCoilcoord: 2702..2765
NoneNo IPR availableCOILSCoilCoilcoord: 2225..2259
NoneNo IPR availableCOILSCoilCoilcoord: 1507..1527
NoneNo IPR availableCOILSCoilCoilcoord: 2770..2790
NoneNo IPR availableCOILSCoilCoilcoord: 726..802
NoneNo IPR availableCOILSCoilCoilcoord: 1744..1799
NoneNo IPR availableCOILSCoilCoilcoord: 2868..2944
NoneNo IPR availableCOILSCoilCoilcoord: 2151..2178
NoneNo IPR availableCOILSCoilCoilcoord: 1571..1626
NoneNo IPR availableCOILSCoilCoilcoord: 951..992
NoneNo IPR availableCOILSCoilCoilcoord: 540..627
NoneNo IPR availableCOILSCoilCoilcoord: 1804..1824
NoneNo IPR availableCOILSCoilCoilcoord: 2274..2448
NoneNo IPR availableCOILSCoilCoilcoord: 1389..1426
NoneNo IPR availableCOILSCoilCoilcoord: 3016..3053
NoneNo IPR availableCOILSCoilCoilcoord: 2456..2694
NoneNo IPR availableCOILSCoilCoilcoord: 1448..1468
NoneNo IPR availableCOILSCoilCoilcoord: 1910..1951
NoneNo IPR availableCOILSCoilCoilcoord: 2183..2203
NoneNo IPR availableCOILSCoilCoilcoord: 256..276
NoneNo IPR availableCOILSCoilCoilcoord: 1959..2022
NoneNo IPR availableCOILSCoilCoilcoord: 448..475
NoneNo IPR availableCOILSCoilCoilcoord: 20..82
NoneNo IPR availableCOILSCoilCoilcoord: 483..528
NoneNo IPR availableCOILSCoilCoilcoord: 2024..2149
NoneNo IPR availableGENE3D1.20.5.50coord: 1908..2024
e-value: 0.0052
score: 16.0
NoneNo IPR availableGENE3D1.20.5.340coord: 711..766
e-value: 0.52
score: 10.2
NoneNo IPR availableGENE3D1.20.120.570coord: 1065..1123
e-value: 0.26
score: 10.2
NoneNo IPR availableGENE3D1.10.287.620coord: 1635..1800
e-value: 0.0013
score: 17.8
NoneNo IPR availableGENE3D1.20.120.330coord: 2189..2309
e-value: 3.2E-7
score: 29.6
coord: 2523..2631
e-value: 3.9E-8
score: 32.6
coord: 3001..3172
e-value: 0.022
score: 13.9
coord: 1281..1414
e-value: 8.2E-6
score: 25.0
NoneNo IPR availableGENE3D1.20.120.330coord: 2310..2438
e-value: 2.6E-13
score: 49.4
NoneNo IPR availableGENE3D1.20.5.730coord: 72..152
e-value: 0.2
score: 11.2
coord: 638..710
e-value: 0.029
score: 13.9
NoneNo IPR availableGENE3D1.20.5.1000coord: 2137..2188
e-value: 2.9E-4
score: 20.3
coord: 872..945
e-value: 0.14
score: 11.6
NoneNo IPR availableGENE3D1.20.5.340coord: 946..1064
e-value: 2.0E-4
score: 20.6
coord: 2026..2136
e-value: 7.4E-8
score: 31.7
NoneNo IPR availableGENE3D1.20.5.400coord: 3191..3280
e-value: 0.0012
score: 18.3
coord: 16..71
e-value: 0.032
score: 13.7
NoneNo IPR availableGENE3D1.20.5.50coord: 767..871
e-value: 0.013
score: 14.7
coord: 2439..2522
e-value: 1.7E-7
score: 30.6
NoneNo IPR availableGENE3D1.20.1170.10coord: 2632..2893
e-value: 5.8E-8
score: 31.5
coord: 153..437
e-value: 7.8E-7
score: 27.8
NoneNo IPR availableGENE3D1.20.5.170coord: 1202..1280
e-value: 0.001
score: 18.7
coord: 1829..1907
e-value: 1.1E-4
score: 21.7
coord: 1124..1201
e-value: 1.9E-9
score: 37.0
coord: 438..530
e-value: 0.23
score: 11.1
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 1114..1297
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 2310..2412
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 2385..2589

Blast
[Close]
BLAST of TCONS_00022875-protein vs. Swiss-Prot (Human)
Match: CENPF (Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.249e-19
Identity = 111/387 (28.68%), Postives = 177/387 (45.74%), Query Frame = 0 
Query:    1 MSWAQDEWKNNLPHVAVQKINAMEKNIEQLQKDQQQKKFKIESLEASNEHQRKKTDQEKAEAANLKKEIHGLEEQIRSISVSHDKVLHELSTKDNRISCLDGQLSKMKSSLDKENNSVAKLKMELERA-VASQNKNLELLE-QKDQDI--AKLSKRLKLSSSDDVFNAAPANKNNSSSEQSQADVSSLINFDESTEKVSNAAPPDLLQFGNTPQKPASKS----------SQSSQNSNTFNIFGDTLMDYAE-----TATESSQQGPDTD-----------------MKAKINELEGSIRKYE-----HEINLMKSNSKDF---RLSYDKLKAECDSKTMRCEKMEHEIIKLTSSMDEATMKYEEQTTSLKKLQKQYECERHNNQAA 343
            MSWA +EWK  LP  A+QKI  +E  +++L+K++QQ++F+++SLEA+ + Q++K + EK E  NLK+E   L E   S+  +  K+ HEL  K+++++  +GQL+  K  ++K    + + K ELER+  A+Q+ ++ L      Q I    L+     S S         NK     ++ +A+V +L       +K S   P   +   +  +  AS S          S  S NS    I  D    Y       T + S+ Q    D                 +KA+  EL   I + E     HE   MK     F   +L  +K K E   K     K   E+++ T+  D+A+ KY      LKKL +   C+R N ++A
Sbjct:    1 MSWALEEWKEGLPTRALQKIQELEGQLDKLKKEKQQRQFQLDSLEAALQKQKQKVENEKTEGTNLKRENQRLMEICESLEKTKQKISHELQVKESQVNFQEGQLNSGKKQIEKLEQELKRCKSELERSQQAAQSADVSLNPCNTPQKIFTTPLTPSQYYSGSKYEDLKEKYNKEVEERKRLEAEVKAL-----QAKKASQTLPQATMNHRDIARHQASSSVFSWQQEKTPSHLSSNSQRTPIRRDFSASYFSGEQEVTPSRSTLQIGKRDANSSFFDNSSSPHLLDQLKAQNQELRNKINELELRLQGHEKE-MKGQVNKFQELQLQLEKAKVELIEKEKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESA 381
The following BLAST results are available for this feature:
BLAST of TCONS_00022875-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CENPF5.249e-1928.68Centromere protein F OS=Homo sapiens GN=CENPF PE=1... [more]
back to top