TCONS_00022866-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022866-protein
Unique NameTCONS_00022866-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022866-protein ID=TCONS_00022866-protein|Name=TCONS_00022866-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
KVLKMEWNMLPAGVVKKILSGGKGELASFPDGSKVWFHFRTFVIKEGDER
QLLDDSRVQSDAFELLIGKQFKLDVWEKLIKTMRINEVAEFICQPALVGS
YPIVSKSLRGIWSKDKDKTEHKHQCGFAALSEGLGYSDLDEYVKNPSPLA
FQIELVKLELPGEYEQDLWSISIDEKAKLIPKWKEEGNQLYKDGKFDAAS
KKYSGALGCLEQLSTREKPGSNEWQEIEQQKIPFLLNFSQCMLKTKEYYK
AIEHLTTVLEKDSKNVKAYFRRASAYHFVFNFHKAKLDYKQAKELDKSLT
KTIDKELALIDKDEAQKNKEDKEKYKNAFA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012852XLOC_012852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022866TCONS_00022866Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001179PPIase_FKBP_dom
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 232..265
e-value: 34.0
score: 10.3
coord: 266..299
e-value: 0.28
score: 20.2
coord: 180..213
e-value: 270.0
score: 2.4
NoneNo IPR availableGENE3D1.10.150.160coord: 171..241
e-value: 4.1E-8
score: 32.7
NoneNo IPR availableGENE3D3.10.50.40coord: 4..159
e-value: 3.5E-19
score: 68.7
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 133..158
coord: 5..97
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 31..155
e-value: 2.1E-5
score: 24.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 242..327
e-value: 2.6E-11
score: 42.9
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 170..299
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 232..299
score: 11.383

Blast
[Close]
BLAST of TCONS_00022866-protein vs. Swiss-Prot (Human)
Match: AIP (AH receptor-interacting protein OS=Homo sapiens GN=AIP PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.030e-95
Identity = 138/321 (42.99%), Postives = 211/321 (65.73%), Query Frame = 0 
Query:   13 GVVKKILSGGKGELASFPDGSKVWFHFRTFVIKEGDERQLLDDSRVQSDAFELLIGKQFKLDVWEKLIKTMRINEVAEFICQPALVGSYPIVSKSLRGIWSKDKDKTE-HKHQCGFAALSE--GLGYSDLDEYVKNPSPLAFQIELVKLELPGEYEQDLWSISIDEKAKLIPKWKEEGNQLYKDGKFDAASKKYSGALGCLEQLSTREKPGSNEWQEIEQQKIPFLLNFSQCMLKTKEYYKAIEHLTTVLEKDSKNVKAYFRRASAYHFVFNFHKAKLDYKQAKELDKSLTKTIDKELALIDKDEAQKNKEDKEKYKNAFA 330
            G+ K+++  G+GEL  F DG+K  FH+RT  +   DE  +LDDSR +    EL+IGK+FKL VWE ++ TMR  E+A+F+C    V  YP+V+KSLR I +  KD  E  +H CG A + E   LG++DLD   +NP PL F +E++K+E PG Y+QD W+++ +EKAK +P   +EGN+LY++G    A+ KY  A+ CL+ L  +E+PGS EW +++QQ  P LLN+ QC L  +EYY+ ++H +++L K   NVKAYF+R  A+  V+N  +A+ D+ +  ELD +L   + +EL  ++    QK++EDK +++  F+
Sbjct:   12 GIQKRVIQEGRGELPDFQDGTKATFHYRT--LHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNI-AVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTYQQDPWAMTDEEKAKAVPLIHQEGNRLYREGHVKEAAAKYYDAIACLKNLQMKEQPGSPEWIQLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAVWNAQEAQADFAKVLELDPALAPVVSRELQALEARIRQKDEEDKARFRGIFS 329
The following BLAST results are available for this feature:
BLAST of TCONS_00022866-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIP2.030e-9542.99AH receptor-interacting protein OS=Homo sapiens GN... [more]
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