TCONS_00022833-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022833-protein
Unique NameTCONS_00022833-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1014

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022833-protein ID=TCONS_00022833-protein|Name=TCONS_00022833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1014bp
INYKMKLKMKHSLLALWTVVGICECFSAHPFTPPQQQTFSSQFISPNQYV
NGWYQPHRYQGNKGSHHVRTRSIYVPDQMKSNHVMGTRHPTWSFWSKWTS
CSKTCAGGVTSRTRVCKSEETPLRFNYEENTTSEEEQGGGRGASKKCAGK
PREVVACNTQPCLNGHTLRLMKRIARSRQCSAYNKIPYRGDKYNWVPYLK
KDADCELNCMPRKSRFFKTFGNVADGTICGKAGGFHCVKGKCVRRREEAT
KRQAVGRTRNTTPKHTSRSQQTTQRPKQRFSYIIKPMVVPIQWKKVSRTF
HTSRYATNLEASIKAFLIPIKAVNVTIAEIYSSSSKIVLKASRHRALING
RSLVQESRKMYFDGSIIDYNSGDNNGGREKITISGPLRRNFYIDILKNGS
LTDILYEYSIPTKNMNYVREVARRRQYNPIRYQQQHFPAYQQNYVTNAGL
NHQGKVPLPVGKVPPYHGANNRRIPFNGNQQRRFNNNPFPPRVTFPLNRP
VNARVVPPFVPNANTNTHFNGNFNTFGNNRVIGGTRGPINNNVQNIPFNH
RWFISGFTNCTKKCGGGEQEMVFRCFEARGGGSNGRFVEDAKCKEGEKPA
VRRRMCNVQPCPYEWKTSRWSDCSKRCGIDAVKTRRVRCSRVTHVAGRTH
DETVKDELCERTDKPESEMKCPFKPCNYRWHFDEWSECSKKCDYGMQHRD
VHCRHVAGFRLPNRYCDVKYQPNGTRNCMMRYCSVGWFASQWNECSSQCG
EGIQTRHVVCSSSTGDVLDERKCRGQQKLVTQRACNGKVCKEGVWLSTEW
TKCSTSCGMGKQFRSAFCLVQNDQGVNQVVSDVFCRTKTKPTLMKRCYEK
ECKPMWHTNAWSQCNCTLGTQTRHQICMTSENRKARGCEWSSRPDMSRDC
SQKCGKKENTERKSKNLLERKSTVVQEGKPAHSKQPARKNNVRLSSRVDT
QPRRKITKAXTGPRKQCKTIKQSRYTTKKENHKSSNNDYYWTYNNDQRTH
YNGRLHKKENNDHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012830XLOC_012830Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022833TCONS_00022833Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR010294ADAM_spacer1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 614..672
e-value: 2.2
score: 6.3
coord: 794..853
e-value: 0.056
score: 20.4
coord: 679..734
e-value: 0.0087
score: 25.3
coord: 551..612
e-value: 0.34
score: 13.4
coord: 855..905
e-value: 0.91
score: 9.7
coord: 92..163
e-value: 8.9E-7
score: 38.5
coord: 736..791
e-value: 0.0039
score: 26.4
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 791..852
e-value: 1.0E-7
score: 31.8
coord: 853..905
e-value: 0.0066
score: 16.3
coord: 677..733
e-value: 2.1E-10
score: 40.3
coord: 734..790
e-value: 9.4E-11
score: 41.5
coord: 613..676
e-value: 4.2E-8
score: 33.0
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 88..162
e-value: 7.3E-12
score: 44.9
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 93..122
e-value: 6.3E-4
score: 19.8
coord: 682..733
e-value: 6.0E-4
score: 19.9
coord: 798..825
e-value: 9.1E-4
score: 19.3
coord: 740..790
e-value: 8.8E-5
score: 22.6
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 549..612
e-value: 5.2E-7
score: 29.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 792..853
score: 9.616
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 89..163
score: 12.217
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 733..791
score: 10.653
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 611..672
score: 8.283
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 676..732
score: 9.528
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 737..790
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 794..852
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 606..676
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 551..611
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 88..162
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 671..733
IPR010294ADAM-TS Spacer 1PFAMPF05986ADAM_spacer1coord: 310..411
e-value: 1.2E-13
score: 51.1

Blast
[Close]
BLAST of TCONS_00022833-protein vs. Swiss-Prot (Human)
Match: THSD4 (Thrombospondin type-1 domain-containing protein 4 OS=Homo sapiens GN=THSD4 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 9.624e-62
Identity = 200/774 (25.84%), Postives = 306/774 (39.53%), Query Frame = 0 
Query:  140 GRGASKKCAGKPREVVACNTQPCLNGHTLRLMKRIARSRQCSAYNKIPYRGDKYNWVPY--LKKDADCELNCMPRKSRFF-KTFGNVADGTICGKAGGFHCVKGKC--VRRREEATKRQAVGRTRNTTPKHTSRSQQTTQRPKQRFSYIIKPMVVPIQWKKVSRTFHTSRYATNLEASIKAFLIPIKAVNVTIAEIYSSSSKIVLKASRHRALINGRSLVQESRKMYFDGSIIDY---NSGDNNGGREKITISGPLRRNFYIDILKNGSLTDILYEYSIPTKNMNYVREVARRRQYNPIRYQQQHFPAYQQNYVTNAGLNHQGKVPLPVGKVPPYHGANNRRIPFNGNQQRRFNNNPFPPRVTFPLNRPVNARVVPPFVPNANTNTHFNGNFNTFGNNRVIGGTRGPINNNVQNIPFNHRWFISGFTNCTKKCGGGEQEMVFRCFEARGGGSNGRFVEDAKCKEGEKPAVRRRMCNVQPCPYEWKTSRWSDCSKRCGIDAVKTRRVRCSRVTHVAGRTHDETVKDELCERTDKPESEMKCPFKPCNYRWHF-DEWSECSKKCDYGMQHRDVHCRHVAGFRLPNRYCDVKYQPNGTRNCMMRYCSVGWFASQWNE-CSSQCGEGIQTRHVVCSSSTGDVLDERKCRGQQKLVTQRACNGKVCKEGV-WLSTEWTKCSTSCGMGKQFRSAFCLVQNDQGVNQVVSDVFCRTKTKPTLMKRCYEKECKPMWHTNAWSQC--NCTLGTQTRHQICMTSENRKARGCEWSSRPDMSRDC 900
             R  +  C G  R+   CNT  C          R  R  QC++YN  P+ G  Y W P+  +K +  CELNC     RF+ +    V DGT C + G   CV G+C  +   +     + V +       +T           Q  S + K  +  + + +V                     IP  A  + I E+Y S++ + L++   R++ING   +    K    G++  Y   N   +  G E     GP      + ++       + YEY I   N    +    RR   P   Q           VT      +G+            G N  +    G     F +       TFP+  P        F P+               +N V    + P  +       +H W   G T C+  CG G Q  +FRC       S      ++ C    KP      CN+ PCP  W    WS+CSK CG+  ++ R+V C +V   A R+   TV+   C+  +KPE+   C  K C+  W    +W+ CS  C  G + RDV C    G  + +  C++K +PN   NC M  C+  WF ++W+E CS++CG G++TR VVC ++    L    C G  +      C+   C   V W +  W++CS  CG G Q R   C+ +N     +V+    C    KP   + C+ K C   W +  WS C  +C  G + R   C++ +   +  C+   +P+    C
Sbjct:  284 ARSTAISCIGAYRQYKLCNTNVCPES------SRSIREVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQAMGYRFYVRQAEKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTG---------CQVVSGVFKHALTSLGYHRVVE-------------------IPEGATKINITEMYKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYKRPNEISSTAG-ESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGTNAISPQVPPHRRPGEPFNGQM----------VTEGRSQEEGE----------QKGRNEEKEDLRGEAPEMFTSES---AQTFPVRHPDR------FSPHRP-------------DNLVPPAPQPPRRSR------DHNWKQLGTTECSTTCGKGSQYPIFRCVHR----STHEEAPESYCDSSMKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGL-GMQHRQVLCRQV--YANRSL--TVQPYRCQHLEKPETTSTCQLKICS-EWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGC-GNNRPAEATPCDNGPCTGKVEWFAGSWSQCSIECGSGTQQREVICVRKNADTF-EVLDPSECSFLEKPPSQQSCHLKPCGAKWFSTEWSMCSKSCQGGFRVREVRCLSDDMTLSNLCDPQLKPEERESC 962
The following BLAST results are available for this feature:
BLAST of TCONS_00022833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THSD49.624e-6225.84Thrombospondin type-1 domain-containing protein 4 ... [more]
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