TCONS_00022564-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022564-protein
Unique NameTCONS_00022564-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length399

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022564-protein ID=TCONS_00022564-protein|Name=TCONS_00022564-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MSYRDIRNFTEMMRALGYPRLISMENFRNPNFSLVAEILKWLVLRYDPNT
DIPMDVDTENDRVLFIKSVAQFMMTKAHIKLNTKKLYGADGLAVKELLKV
TTVLYDATQKSKKSDEDEMAASYLPRKVDFNSKISELKMARQLASEITVK
GSTLHQLLGREVDLREIRTASVARPLDLNEIEKNIENAVNEAQSDLDKTR
NQLDNIASDEANLGAKIEKRTAELERNQKRLKNLESVRPAFMDEYEGLEK
DLETLYKTYIEKYRNLTYLEQQHEIMNKTELDKFNDSDNPLKAAMRAREE
HEDMIRRRLDSAGSETDGEEEDEDVLVADNDHPVKQGKPKVVGSMAGALD
SDDDDSGDLSSGSEGVEDGLLDDDDETGSDDEDDDDQIQTGGGDSDDGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012652XLOC_012652Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022564TCONS_00022564Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019366Clusterin-associated_protein-1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..209
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableGENE3D1.20.5.340coord: 176..307
e-value: 6.4E-5
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..399
IPR019366Clusterin-associated protein-1PFAMPF10234Cluap1coord: 14..281
e-value: 4.8E-112
score: 373.6

Blast
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BLAST of TCONS_00022564-protein vs. Swiss-Prot (Human)
Match: CLUA1 (Clusterin-associated protein 1 OS=Homo sapiens GN=CLUAP1 PE=1 SV=4)

HSP 1 Score: 378.252 bits (970), Expect = 2.269e-129
Identity = 203/367 (55.31%), Postives = 268/367 (73.02%), Query Frame = 0 
Query:    1 MSYRDIRNFTEMMRALGYPRLISMENFRNPNFSLVAEILKWLVLRYDPNTDIPMDVDTENDRVLFIKSVAQFMMTKAHIKLNTKKLYGADGLAVKELLKVTTVLYDATQKSKKSDEDEMAASYLPR-KVDFNSKISELKMARQLASEITVKGSTLHQLLGREVDLREIRTASVARPLDLNEIEKNIENAVNEAQSDLDKTRNQLDNIASDEANLGAKIEKRTAELERNQKRLKNLESVRPAFMDEYEGLEKDLETLYKTYIEKYRNLTYLEQQHEIMNKTELDKFNDSDNPLKAAMRAREEHEDMIRRRLDSAGSETDGEEEDE-DVLVADNDHP--------VKQGKP--KVVGSMAGALDSDDDD 355
            MS+RD+RNFTEMMRALGYPR ISMENFR PNF LV+E+L WLV RY+P TDIP DVDTE DRV FIK++AQFM TKAHIKLNTKKLY ADG AVKELLK+T+VLY+A  K+K  +  E+    + + K D  SKI++LK ARQLASEIT KG++L+ LLG EV+LRE+RT ++ARPL++NE EK +  A+ E  + + KT++ L+N+ASDEANL AKIEKR  ELERN+KRL+ L+SVRP FMDEYE  E++L+  Y TY+EK++NLTYLEQQ E  ++ E ++F ++ N L       +E E  + +   +  S+ D +E+DE D  + +   P        + QG+P  ++VG+M G  DSDD++
Sbjct:    1 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAM-KTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGG-DSDDNE 365
The following BLAST results are available for this feature:
BLAST of TCONS_00022564-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLUA12.269e-12955.31Clusterin-associated protein 1 OS=Homo sapiens GN=... [more]
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