TCONS_00022360-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022360-protein
Unique NameTCONS_00022360-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022360-protein ID=TCONS_00022360-protein|Name=TCONS_00022360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MEARSIVFFALLSKISVMHTAEVFYHTHEYIQLKEGVSIDALEEDQAQLN
ASSITECFLHNKQQSYYIQALRNGSHWICSFFDYVQNVSTKFIPKEGSEV
FRLDFSSTINECLGWLRLGNKKDGVYWINIPNGKRTRVFCDMTTDGGGWT
VFQKRFDGSVDFYQNWESYRNGFGSLEGEHWLGLENIHLLTSISSNTELR
LYGKRFNGDENFANFENFVIGDEASKYRLTTGTVTTGAHHERFKTESDGK
MFTTKDNDNDRNPNENCAIKYPGAWWFNSCFALNFNGRYFAEYETYQYAK
GIHWGGWVGLLESLKESAMMMRSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012545XLOC_012545Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022360TCONS_00022360Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 107..324
e-value: 5.2E-68
score: 241.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 110..322
e-value: 1.3E-59
score: 201.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 103..324
score: 48.999
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 112..322
e-value: 8.57221E-77
score: 235.983
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 107..323
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 249..316
e-value: 1.4E-20
score: 72.6
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 37..248
e-value: 7.0E-54
score: 182.2

Blast
[Close]
BLAST of TCONS_00022360-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.498e-49
Identity = 94/228 (41.23%), Postives = 125/228 (54.82%), Query Frame = 0 
Query:   95 KEGSEVFRLDFSSTINECLGWLRLGNKKDGVYWINIPNGKRTRVFCDMTTDGGGWTVFQKRFDGSVDFYQNWESYRNGFGSLEGEHWLGLENIHLLTSISSNTELRLYGKRFNGDENFANFENFVIGDEASKYRLTTGTVTTGAHHERFKTESDGKMFTTKDNDNDRNPNENCAIKYPGAWWFNSCFALNFNGRYFAEYETYQYAKGIHWGGWVGLLESLKESAMMMR 322
            + G  V  L        C   L  G    G Y + +P G+   VFCDM T+GGGW VFQ+R DGSVDF+++W SYR GFG+ E E WLG EN+H LT +  N ELR+  + FNG+  FA++  F +  E   Y+L  G  + G   +     S G+ FTT D D+D + N NCA+   GAWW+ SC+  N NGRY A  E   +  GI W    G+    +   MM+R
Sbjct:   76 EPGDPVNLLRCQEGPRNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLT-LQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHS-GRPFTTYDADHDSS-NSNCAVIVHGAWWYASCYRSNLNGRY-AVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR 299
The following BLAST results are available for this feature:
BLAST of TCONS_00022360-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN32.498e-4941.23Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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