TCONS_00022341-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022341-protein
Unique NameTCONS_00022341-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length451

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022341-protein ID=TCONS_00022341-protein|Name=TCONS_00022341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MATNTWGRDEILGNFQAATGNEDFASCLQILESYGWDLQLALNSYFQDQE
TQPPTSNSRNSPVIVDDPPAFINLDPTPETVGNLQTDSASSSSHKTLTFE
ISWHTQNLTIALTENQTVEELKRLLHLQTDVAMDEINLEGWPSGDSAVQS
DTVLSTLNLSSVTHLVFHVPAKVTVSPAEYLACNIPDIASQRKEDENKEF
HAPRAINVSDSFNQETSAPQISLNVHHNGRDYRLRYNRNETVKDVKRELF
ILTKINTRNQEWNGWPEGANDNSKLSELELAPDHFLLIQSKEGESSNGHT
IINEKPMDSGTAGSVEDSEDELMIMHHDEDYDDDAIFDNDAAQSKKPKTL
LARDSNDTFDVMIQFQHNFVERYGDVHPPFYVGPLKNAIEEAGGSRAAER
RPLLLYLHHDSSVLTHIFCSQILCSQQLVSYVTHNFVTWPWDMSHESNRQ
R
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012527XLOC_012527Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022341TCONS_00022341Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006577UAS
IPR009060UBA-like
IPR012336Thioredoxin-like_fold
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006577UASSMARTSM0059445neu3coord: 364..451
e-value: 1.2E-6
score: 38.1
NoneNo IPR availablePFAMPF14555UBA_4coord: 9..50
e-value: 5.4E-10
score: 38.8
NoneNo IPR availableGENE3D3.10.20.90coord: 205..298
e-value: 1.8E-5
score: 24.1
NoneNo IPR availableGENE3D3.10.20.90coord: 76..168
e-value: 0.015
score: 14.6
NoneNo IPR availableGENE3D1.10.8.10coord: 8..43
e-value: 3.9E-10
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..89
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 8..48
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 363..448
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 91..168
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 209..288

Blast
[Close]
BLAST of TCONS_00022341-protein vs. Swiss-Prot (Human)
Match: FAF1 (FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.446e-54
Identity = 138/478 (28.87%), Postives = 227/478 (47.49%), Query Frame = 0 
Query:    1 MATNTWGRDEILGNFQAATGNEDFASCLQILESYGWDLQLALNSYFQDQ----------ETQP-PTSNSRNSPVIVDDPPAFINLDPTPETVGNLQTDSASSSSHKTLTFEISWHTQNLTIALTENQTVEELKRLLHLQTDVAMDEINLEGWPSGDSAVQSDTVLSTLNLSSVTHLVFHVPAKVTVSPAEYLACNIPDIASQRKEDENKEFHAPRAINVSDSFNQETSAPQISLNVHHN--GRDYRLRYNRNETVKDVKRELFILTKINTRNQEWNGWPEGANDNSK-LSELELA-PDHFLLIQSKEGESSNGHTIINEKPMDSGTAGSVEDSEDELMIMHH-----DEDYDDDAIFDND-------AAQSKKPKTLLARDSNDTFDVMIQFQHNFVERYGDVHPPFYVGPLKNAIEEAGGSRAAERRPLLLYLHHDSSVLTHIFCSQILCSQQLVSYVTHNFVTWPWDMSHESNRQR 451
            MA+N   R+ IL +FQA TG E+    + +LE   WDL  A+N     +          ET P P  N  + P       +     P       + +        + L F + +  +N+ + L +  TV E+K++L  +  + + ++ L+GW +GD  V+  TVL +L+L     L    P                        D      +  A  + +S NQ        L + H    R+Y L ++ + T+++VKR ++ LT I  R+Q W GWP  A D+S  L+E  L+ P H L +  +                 S  A + E SE+++  +H       +D++D   F  D       A+ + +   ++  ++ +  D ++QF   F  RYGD HP F++G L+ A +EA   +A +R+ L +YLHHD SVLT++FCSQ+LC++ +VSY++ NF+TW WD++ +SNR R
Sbjct:    1 MASNM-DREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAPTSSSSSAFRPV------MPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGD--VEDSTVLKSLHLPKNNSLYVLTP------------------------DLPPPSSSSHAGALQESLNQ-----NFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSMCLAESGLSYPCHRLTVGRR-----------------SSPAQTREQSEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRAR 423
The following BLAST results are available for this feature:
BLAST of TCONS_00022341-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAF14.446e-5428.87FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE... [more]
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