TCONS_00022324-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022324-protein
Unique NameTCONS_00022324-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022324-protein ID=TCONS_00022324-protein|Name=TCONS_00022324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MTDRNEDSSKEEHHGGALYPCQPTKPRDEDCCGNGCSTCVFDLYELQLSR
WRQRCQRIDEQNDEEDIEKDEIISIFEYRSFRLIDIIDHSPILYFTFEIP
NNKKLPMARGQHLVARCTDKNDVSIVRPYTPVSAPHQRGSFQVAVKIYEE
GAMSRSMKTWKIGSSVDWRGPFGHLHTVHEKCQQLVMLAGGTGITPMIQF
ADQILSNEDSETRILLCYSAHDADEIIQKERFDRWKDFWNFKIHYFITGE
QANEKKEEKIWRYGDEVHHQHLDKQWFEGHLIQFKNVDPSDQLFFVCGST
LFNNAMKQLVREMFKVTDERIVTFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012519XLOC_012519Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022324TCONS_00022324Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001709Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR001834NADH-Cyt_B5_reductase
IPR001433OxRdtase_FAD/NAD-bd
IPR008333OxRdtase_FAD-bd_dom
IPR019180Oxidoreductase-like_N
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001709Flavoprotein pyridine nucleotide cytochrome reductasePRINTSPR00371FPNCRcoord: 186..205
score: 42.82
coord: 224..235
score: 21.84
coord: 127..134
score: 45.55
IPR001834NADH:cytochrome b5 reductase (CBR)PRINTSPR00406CYTB5RDTASEcoord: 163..177
score: 40.97
coord: 224..235
score: 31.6
coord: 127..134
score: 64.32
coord: 186..205
score: 55.42
coord: 105..116
score: 30.21
IPR001433Oxidoreductase FAD/NAD(P)-bindingPFAMPF00175NAD_binding_1coord: 187..305
e-value: 7.2E-13
score: 49.0
NoneNo IPR availableGENE3D2.40.30.10coord: 76..165
e-value: 1.8E-16
score: 60.0
NoneNo IPR availableGENE3D3.40.50.80coord: 166..323
e-value: 6.6E-26
score: 90.3
NoneNo IPR availableCDDcd06183cyt_b5_reduct_likecoord: 81..324
e-value: 2.61848E-54
score: 178.529
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 166..313
IPR008333Oxidoreductase, FAD-binding domainPFAMPF00970FAD_binding_6coord: 94..175
e-value: 4.6E-18
score: 65.3
IPR019180Oxidoreductase-like, N-terminalPFAMPF09791Oxidored-likecoord: 16..58
e-value: 2.0E-10
score: 40.1
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 76..178
score: 11.502
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 74..176

Blast
[Close]
BLAST of TCONS_00022324-protein vs. Swiss-Prot (Human)
Match: NB5R5 (NADH-cytochrome b5 reductase-like OS=Homo sapiens GN=CYB5RL PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 3.709e-37
Identity = 91/287 (31.71%), Postives = 139/287 (48.43%), Query Frame = 0 
Query:   22 QPTKPRDEDCCGNGCSTCVFDLYELQLSRWRQRCQRIDEQNDEEDIEKDEIISIFEYRSFRLIDIIDHSPILYFT----FEIPNNKKLPMARGQHLVARCTDKNDVSIVRPYTPVSAPHQRGSFQVAVKIYEEGAMSRSMKTWKIGSSVDWRGPFGHLHTVHEKCQQLVMLAGGTGITPMIQFADQILSNEDSETRILLCYSAHDADEIIQKERFDRWKDFWNFKIHYFITGEQANEKKEEKIWRYGDEVHHQHLDKQWFEGHLIQFKNVDPSDQLFFVCGSTLFNN 304
            +PT+P    CCG+GCS CVFDLY   L+RW +  Q   +++     E     S     +F    II    +   T    F +P N +L +  GQHL+ R    +D+ I R YTP+S  +  G F+V +K Y+ G MSR +++W++G +  WRGPFG       +  +L++LA GTG+ PM+     I  NE+ ET + L       + I  K        FWN +  + ++ E ++E+     W Y ++ H  HL +   +  L+      P      VCGS  F  
Sbjct:   19 RPTEPLPSQCCGSGCSPCVFDLYHRDLARW-EAAQASKDRSLLRGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRGI-VDDLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIYLKTFLQEQARFWNVRTFFVLSQESSSEQLP---WSYQEKTHFGHLGQDLIK-ELVSCCRRKP---FALVCGSAEFTK 296
The following BLAST results are available for this feature:
BLAST of TCONS_00022324-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NB5R53.709e-3731.71NADH-cytochrome b5 reductase-like OS=Homo sapiens ... [more]
back to top