TCONS_00022080-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022080-protein
Unique NameTCONS_00022080-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022080-protein ID=TCONS_00022080-protein|Name=TCONS_00022080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MKISKKPGIWLLTKFNVVFRKKVSGRKNTNEFATSRQHSQQPYDNVQVDT
LSEEQILDFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTENELEDMIN
EVDFDGSGTIEFPEFITMMARKLRDTDDDIQEAFRVFDQRGTGHISAKEL
HSVMTNLGGEYLTPQEIDEIMHEVDADGDGLINYEEFVEMMASNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012381XLOC_012381Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022080TCONS_00022080Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 94..122
e-value: 2.9E-7
score: 40.1
coord: 166..194
e-value: 2.7E-7
score: 40.2
coord: 129..157
e-value: 0.0063
score: 25.7
coord: 58..86
e-value: 3.7E-8
score: 43.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 128..191
e-value: 2.2E-15
score: 56.8
coord: 59..119
e-value: 5.4E-14
score: 52.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 90..124
score: 11.11
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..89
score: 16.801
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 125..160
score: 14.764
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 162..195
score: 14.486
IPR002048EF-hand domainCDDcd00051EFhcoord: 129..192
e-value: 6.5531E-17
score: 70.6545
IPR002048EF-hand domainCDDcd00051EFhcoord: 58..120
e-value: 7.79111E-22
score: 84.1365
NoneNo IPR availableGENE3D1.10.238.10coord: 84..107
e-value: 3.6E-19
score: 68.1
NoneNo IPR availableGENE3D1.10.238.10coord: 145..192
e-value: 5.0E-20
score: 70.8
NoneNo IPR availableGENE3D1.10.238.10coord: 45..83
e-value: 4.2E-21
score: 74.1
NoneNo IPR availableGENE3D1.10.238.10coord: 108..144
e-value: 2.1E-20
score: 71.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 67..79
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 175..187
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 42..192

Blast
[Close]
BLAST of TCONS_00022080-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.915e-72
Identity = 107/148 (72.30%), Postives = 128/148 (86.49%), Query Frame = 0 
Query:   48 VDTLSEEQILDFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTENELEDMINEVDFDGSGTIEFPEFITMMARKLRDTD--DDIQEAFRVFDQRGTGHISAKELHSVMTNLGGEYLTPQEIDEIMHEVDADGDGLINYEEFVEMMAS 193
             D L+EEQI +FKEAF+LFDKDGDGTITTKELGTVMRSLGQNPTE EL+DMINEVD DG+GTI+FPEF+TMMARK++DTD  ++I+EAFRVFD+ G G+ISA EL  VMTNL GE LT +E+DE++ E D DGDG +NYEEFV+MM +
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
The following BLAST results are available for this feature:
BLAST of TCONS_00022080-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM33.915e-7272.30Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top