TCONS_00022053-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022053-protein
Unique NameTCONS_00022053-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length447

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022053-protein ID=TCONS_00022053-protein|Name=TCONS_00022053-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
MVTGDETNAARAFNRDALDPTLVEDKLIDVCKSLMSQTVDIDFDYKIERT
MTVLHLASALGYLKLIQLLMNWVESNPNKIIQVEACPTCVDQFSLVPIMW
ASAKGHFTTTCVLHQWAESTIELKDACGCTSLSLAMESGHESLVEYLGRL
IKKSTISRENSMNQEQFSSSLSTSFGNPGSVSSTSTSISNVDDSSPRTLG
KTLAFIQSMLNEQMDDLNHAEDEEDDDASLFAAHNEFVNTRQRSVTDESV
ASTSQHSPASPAQNALQSPFNRQMRETAEFCEFFYKAKKIEKDFAELTLT
DQEQEELYRAANVIQTAYKAYKERRKQRDQEFSSATLIQSYYRRYKQYAA
FKKMQKGAVLIQNQYRAHREKSKKKYEAASLIQTNWRRYRQRKCTKSEAN
KLEQQASRRVNRYLQQTTKRFSREFPEEFNAPSTSSQIIDIDFGPNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012375XLOC_012375Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022053TCONS_00022053Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR020683Ankyrin_rpt-contain_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableGENE3D1.20.5.190coord: 385..420
e-value: 0.08
score: 12.4
coord: 363..384
e-value: 1.4E-5
score: 24.4
coord: 241..315
e-value: 0.11
score: 12.0
coord: 343..362
e-value: 2.2E-6
score: 27.0
NoneNo IPR availableGENE3D4.10.270.10coord: 316..342
e-value: 3.6E-6
score: 26.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..267
NoneNo IPR availableCDDcd00204ANKcoord: 28..147
e-value: 9.14318E-9
score: 52.0006
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 353..375
e-value: 61.0
score: 7.2
coord: 306..328
e-value: 18.0
score: 11.6
coord: 330..352
e-value: 9.7
score: 13.8
coord: 377..396
e-value: 28.0
score: 10.0
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 334..351
e-value: 0.03
score: 14.0
coord: 377..394
e-value: 0.0083
score: 15.7
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 375..404
score: 6.723
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 21..240
e-value: 1.1E-14
score: 53.9
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 28..147
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 285..394

Blast
[Close]
BLAST of TCONS_00022053-protein vs. Swiss-Prot (Human)
Match: CMTA1 (Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 5.094e-26
Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 0 
Query:  258 PASPAQNALQSPFNRQMRE----------TAEFCEFFYKA--KKIEKDFAELTLTDQEQEELYRAANVIQTAYKAYKERRKQRDQEFSSATLIQSYYRRYKQYAAFKKMQKGAVLIQNQYRAHREKSK--KKYEAASLIQTNWRRYR---------------QRKCTKSEANKLEQQASRRVNRYLQQ 416
            P +P+ N   SP    + E           A++ EF   +  +K+E +FA+LTL+D EQ ELY AA ++QTA++ YK R  +  QE ++A +IQ  YR+YKQYA +KKM + A+LIQ+++R++ E+ K  +   AA LIQ  +R Y+               Q+K   S   K + QA+R++ R+L++
Sbjct: 1463 PLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAARLVQTAFRKYKGRPLREQQEVAAA-VIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQAARKIMRFLRR 1649

HSP 2 Score: 92.0485 bits (227), Expect = 1.028e-19
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0 
Query:   24 EDKLIDVCKSLMSQTVDIDFDYKIE----RTMTVLHLASALGYLKLIQLLMNWVESNPNKI-IQVEACPTCVDQFSLVPIMWASAKGHFTTTCVLHQWAESTIELKDACGCTSLSLAMESGHESLVEYLGRL 150
            E +++ VC+ +MS+       + I     R MT+LHLA+A GY  LIQ L+ W   + + I +++E  P  VD FS  P+MWA A GH     VL++W    I + D+ G   L +A   GH  L E L  L
Sbjct: 1035 ESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL 1166
The following BLAST results are available for this feature:
BLAST of TCONS_00022053-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTA15.094e-2636.17Calmodulin-binding transcription activator 1 OS=Ho... [more]
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