TCONS_00022032-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022032-protein
Unique NameTCONS_00022032-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022032-protein ID=TCONS_00022032-protein|Name=TCONS_00022032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MENWSHVYNSRTTRQYRREDDMESSFDRSSTCSSFDSESTASTSSSHSQY
SICKRNGRRGGVQMKSNGPDFTVKNGQWTLWVDTLPRAELNNYKVAFSMF
DRKRKGRIGARHLGELMRSLGYNPLEQELSDLIDEFTDRNSSRITFPEFV
TIMAQKRRSSDQYIRDTLDVLDKEGKGLVPITDLQKNLATIGDQLKPEEI
AEIFTDLDIDDDGNVSYDDLVEMISTAPEVFDEPEKQRTQRNRKMSEYTV
KGALKSFFGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012373XLOC_012373Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022032TCONS_00022032Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 92..120
e-value: 13.0
score: 8.7
coord: 199..227
e-value: 0.016
score: 24.4
coord: 128..156
e-value: 35.0
score: 5.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 95..153
e-value: 1.3E-7
score: 31.9
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 182..223
e-value: 2.2E-7
score: 30.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 195..230
score: 11.082
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 159..194
score: 8.125
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 88..123
score: 10.19
IPR002048EF-hand domainCDDcd00051EFhcoord: 163..225
e-value: 4.68269E-7
score: 44.4609
IPR002048EF-hand domainCDDcd00051EFhcoord: 93..154
e-value: 1.9363E-8
score: 48.3129
NoneNo IPR availableGENE3D1.10.238.10coord: 178..227
e-value: 7.0E-10
score: 38.5
NoneNo IPR availableGENE3D1.10.238.10coord: 118..141
e-value: 1.3E-9
score: 37.5
NoneNo IPR availableGENE3D1.10.238.10coord: 79..117
e-value: 3.2E-7
score: 29.7
NoneNo IPR availableGENE3D1.10.238.10coord: 142..177
e-value: 8.1E-8
score: 31.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..52
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 208..220
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 76..232

Blast
[Close]
BLAST of TCONS_00022032-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.544e-32
Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 0 
Query:   81 WVDTLPRAELNNYKVAFSMFDRKRKGRIGARHLGELMRSLGYNPLEQELSDLIDEFTDRNSSRITFPEFVTIMAQKRRSSD--QYIRDTLDVLDKEGKGLVPITDLQKNLATIGDQLKPEEIAEIFTDLDIDDDGNVSYDDLVEMIST 226
              D L   ++  +K AFS+FD+   G I  + LG +MRSLG NP E EL D+I+E     +  I FPEF+T+MA+K + +D  + IR+   V DK+G G +   +L+  +  +G++L  EE+ E+  + DID DG V+Y++ V+M++ 
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
The following BLAST results are available for this feature:
BLAST of TCONS_00022032-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.544e-3238.51Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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