TCONS_00022016-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022016-protein
Unique NameTCONS_00022016-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022016-protein ID=TCONS_00022016-protein|Name=TCONS_00022016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
QGDGGNDGDRDEDAGKADVNRMAQYDVESYSDNDEGDVEADIKPFQCGIC
GKGFQFPNNLIVHSRYHSKSVRKKNIKSEKTEPRRQMNSEKLTSIKGGND
VPKTLQSNLKVKTQNKDRPLALKKEKKVVDLQAFALKCKNQMFIDTFKGQ
KQHKCNVCGKEYMYLPTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHL
KTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSN
NLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGK
EFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFR
CTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHT
GEKPFNCELCGKAFTQSGGLKVHLRKHSRTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012363XLOC_012363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022016TCONS_00022016Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 153..175
e-value: 0.0015
score: 27.8
coord: 45..67
e-value: 0.085
score: 22.0
coord: 209..231
e-value: 0.24
score: 20.5
coord: 321..343
e-value: 6.9E-4
score: 28.9
coord: 237..259
e-value: 0.034
score: 23.3
coord: 405..427
e-value: 9.3E-4
score: 28.5
coord: 265..287
e-value: 2.6E-4
score: 30.3
coord: 349..371
e-value: 8.6E-5
score: 31.9
coord: 293..315
e-value: 5.8E-5
score: 32.5
coord: 377..399
e-value: 4.5E-5
score: 32.9
coord: 181..201
e-value: 43.0
score: 7.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 379..399
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 267..287
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 155..175
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 47..67
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 351..371
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 239..259
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 323..343
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 211..231
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 407..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 295..315
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 377..404
score: 17.308
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 181..208
score: 10.097
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 153..180
score: 12.549
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 45..72
score: 11.468
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 265..292
score: 16.124
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 293..320
score: 17.599
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 209..236
score: 11.136
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 349..376
score: 16.145
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 237..264
score: 15.209
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 321..348
score: 16.207
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 405..431
score: 13.817
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 273..330
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 218..274
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 371..423
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 151..202
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 40..68
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 330..386
NoneNo IPR availableGENE3D3.30.160.60coord: 362..384
e-value: 3.7E-21
score: 74.7
NoneNo IPR availableGENE3D3.30.160.60coord: 385..396
e-value: 1.2E-10
score: 40.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 237..259
e-value: 8.4E-4
score: 19.6
coord: 349..371
e-value: 8.7E-5
score: 22.7
coord: 265..287
e-value: 7.7E-5
score: 22.8
coord: 377..399
e-value: 4.9E-6
score: 26.6
coord: 293..315
e-value: 2.8E-6
score: 27.4
coord: 321..343
e-value: 9.9E-5
score: 22.5
coord: 405..427
e-value: 2.1E-5
score: 24.6
coord: 45..67
e-value: 0.0013
score: 19.0
NoneNo IPR availableGENE3D3.30.160.60coord: 306..326
e-value: 2.9E-19
score: 68.7
coord: 279..305
e-value: 7.2E-22
score: 77.1
coord: 58..115
e-value: 8.2E-6
score: 25.6
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 153..176
e-value: 3.0E-4
score: 20.6
NoneNo IPR availableGENE3D3.30.160.60coord: 327..341
e-value: 5.5E-14
score: 51.4
NoneNo IPR availableGENE3D3.30.160.60coord: 213..225
e-value: 1.7E-5
score: 24.4
NoneNo IPR availableGENE3D3.30.160.60coord: 164..189
e-value: 4.9E-13
score: 48.5
NoneNo IPR availableGENE3D2.20.28.10coord: 190..212
e-value: 4.2E-6
score: 26.1
NoneNo IPR availableGENE3D3.30.160.60coord: 342..361
e-value: 1.4E-17
score: 63.0
NoneNo IPR availableGENE3D2.40.155.10coord: 397..431
e-value: 1.5E-19
score: 70.5
coord: 226..263
e-value: 2.8E-21
score: 76.2
NoneNo IPR availableGENE3D3.30.160.60coord: 116..163
e-value: 9.7E-7
score: 28.3
NoneNo IPR availableGENE3D3.30.160.60coord: 264..278
e-value: 9.3E-15
score: 54.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 19..57
e-value: 2.6E-6
score: 27.1

Blast
BLAST of TCONS_00022016-protein vs. Swiss-Prot (Human)
Match: ZN235 (Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3)

HSP 1 Score: 295.819 bits (756), Expect = 4.903e-93
Identity = 160/394 (40.61%), Postives = 212/394 (53.81%), Query Frame = 0
Query:   38 VEADIKPFQCGICGKGFQFPNNLIVHSRYHSKSVRKKNIKSEKTEPRRQMNSEKLTSIKGGNDVPKTLQSNLKVKTQNKDRPLALKKEKKVVDLQAFALKCKNQMFIDTFKGQKQHKCNVCGKEYMYLPTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHLKTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSNNLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGKEFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFRCTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHTGEKPFNCELCGKAFTQSGGLKVHLRKHSRTK 431
            V    K + C  CGKGF   +NL  H R H+                     +  T  + G    ++      +     ++P       K      F+      +      G+K +KC VCGK +     LQ H R H G+K + CG+CGK F  +   + H + +   KPYKC+ C K F+ S  L  H  +H  +K +KC  C   F+ +++  SH R+HTGEKPFRC VC K F+Q+   Q+H R HTGE+P+KC  CGK F  + +L  H R HTGEKP+ C  CGK ++Q  +LQ+H  +HTGEKPF+C  C+K F+QA  LQ H R HTGEKP+KC  CGKAF+Q   LQ H  IHTGEKPF CE CGK F+ S GL  H R H+  K
Sbjct:  312 VRTGKKRYWCHECGKGFSQSSNLQTHQRVHT-------------------GEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGK-----GFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEK 681          

HSP 2 Score: 283.493 bits (724), Expect = 2.937e-88
Identity = 159/387 (41.09%), Postives = 214/387 (55.30%), Query Frame = 0
Query:   43 KPFQCGICGKGFQFPNNLIVHSRYHSKSVRKKNIKSEKTEPRRQMNSEKLTSIKGGNDVPKTLQSNLKVKTQNKDRPLALKKEKKVVDL-QAFALKCKNQMFIDTFKGQKQHKCNVCGKEYMYLPTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHLKTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSNNLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGKEFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFRCTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHTGEKPFNCELCGKAFTQSGGLKVHLRKHS 428
            KP++C  CGKGF    +L +H R H+    +K  K E                KG      T +S+L    Q  +R    +K  K  D  + F+              +K +KC+ CGK +     L  H R H G+K + C ECGK F +   F +H + +   KP++CNVC K F++S     H  +H  +K +KC VC   F  S NLH+H R+HTGEKP++C  C K F+QA  LQ+H   HTGE+PFKC  C K F+QA  LQ H R HTGEKP+ C  CGK+++Q  +LQ H  IHTGEKPF+C  C K F+ +  L  H R HTGEKP+ C  CGK F+QA    +H R+HTGE+P+ C++C K F+Q   L  H R H+
Sbjct:  373 KPYRCDSCGKGFSRSTDLNIHCRVHTG---EKPYKCE-------------VCGKGF-----TQRSHL----QAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHT 734          

HSP 3 Score: 259.61 bits (662), Expect = 3.023e-79
Identity = 128/283 (45.23%), Postives = 172/283 (60.78%), Query Frame = 0
Query:  149 GQKQHKCNVCGKEYMYLPTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHLKTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSNNLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGKEFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFRCTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHTGEKPFNCELCGKAFTQSGGLKVHLRKHSRTK 431
            G+K   C+   K+  Y   +        G+K + C ECGK F  +     H + +   KPY C+ C K F +S  L  H  IH  +K ++C  C   F+ S +L+ H R+HTGEKP++C VC K F Q   LQ+H R HTGE+P+KC DCGK F+ + +L TH R HT EKP+ C  CGK ++   +L SH R+HTGEKP++C  C K F+ A + Q H R HTGEKPF+C+VCGK F+Q+   Q+H R+HTGEKP+ CE+CGK F  S  L  H R H+  K
Sbjct:  287 GKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEK 569          

HSP 4 Score: 256.529 bits (654), Expect = 4.293e-78
Identity = 144/364 (39.56%), Postives = 196/364 (53.85%), Query Frame = 0
Query:   38 VEADIKPFQCGICGKGFQFPNNLIVHSRYHSKSVRKKNIKSEKTEPRRQMNSEKLTSIKGGNDVPKTLQSNLKVKTQNKDRPLALKKEKKVVDLQAFALKCKNQMFIDTFKGQKQHKCNVCGKEYMYLPTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHLKTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSNNLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGKEFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFRCTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHTG 401
            V    KP++C +CGKGF   ++L  H R H+             +P +  +  K  S          L ++ +V T+ K  P    +  K   L +F L    ++      G+K +KC  CGK +    + Q H R H G+K   C  CGK F  +  F AH + +   KPYKC VC K+F  S  L  H  +H  +K +KC  C   F+ ++NL +H  +HTGEKPF+C  C+K F+QA  LQ+H R HTGE+P+KC  CGK F+Q  +LQ H   HTGEKPF C  CGK ++    L +H R+HTGEKP+ C  C K F+QA     H R HTGE+P+ C VC K F+Q   L  H R+HTG
Sbjct:  396 VHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGE-----------KPYKCGDCGKRFSCSS------NLHTHQRVHTEEK--PYKCDECGKCFSL-SFNLHSHQRVHT----GEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTG 735          

HSP 5 Score: 227.639 bits (579), Expect = 2.376e-67
Identity = 118/285 (41.40%), Postives = 168/285 (58.95%), Query Frame = 0
Query:  148 KGQKQHKCNVCGKEYMYL-PTLQKHMRSHNGQKLHHCGECGKEFDTTRLFNAHLKTNGCRKPYKCNVCEKKFAKSRVLLFHSAIHLKQKRFKCGVCDVSFAVSNNLHSHLRIHTGEKPFRCTVCEKTFAQAGALQSHARTHTGERPFKCTDCGKEFTQAGSLQTHVRTHTGEKPFNCHVCGKSYAQVGSLQSHLRIHTGEKPFRCTVCEKTFAQAGALQLHLRTHTGEKPFKCHVCGKAFAQAGALQSHLRIHTGEKPFNCELCGKAFTQSGGLKVHLRKHSRTK 431
            K  K H  + CGK+ + + P  Q+ +  H GQK +   EC + F+ +     H + +  +K   C+  EK  + S  +    ++   +KR+ C  C   F+ S+NL +H R+HTGEKP+ C  C K+F Q+  L +H   HTGE+P++C  CGK F+++  L  H R HTGEKP+ C VCGK + Q   LQ+H RIHTGEKP++C  C K F+ +  L  H R HT EKP+KC  CGK F+ +  L SH R+HTGEKP+ CE CGK F+ +   + H R H+  K
Sbjct:  231 KRDKVHSNSDCGKDTLKVSPLTQRSI--HTGQKTYQGNECEEAFNDSSSLELHKQVHLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEK 513          
The following BLAST results are available for this feature:
BLAST of TCONS_00022016-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2354.903e-9340.61Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 ... [more]
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