TCONS_00022012-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022012-protein
Unique NameTCONS_00022012-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022012-protein ID=TCONS_00022012-protein|Name=TCONS_00022012-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MAAVSMNPLNQPKVLVTRLKCIECGEGITSQCLKICFAKNVNRNRVLRYI
ELKGFFTNTGEKLFHCSRNLKAQAQICEAAQPQSSCVTKSKQNLFCEEKC
HQKECNVCGKVFTVKCQQSLYSKKQPLKFDICGNCQKNEAFSQEDLNPYK
CDVCGKTFTDSVEFQLHIRKYW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012359XLOC_012359Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022012TCONS_00022012Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.10coord: 55..153
e-value: 0.048
score: 12.9
NoneNo IPR availableGENE3D3.30.160.60coord: 154..171
e-value: 2.4E-6
score: 26.8
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 149..172
score: 10.221
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 146..170

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022012-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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